PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010101670.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB
Protein Properties Length: 303aa    MW: 33116.1 Da    PI: 8.6189
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010101670.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding612.5e-191257147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEde l ++v+ +G+++W++I++ ++ gR++k+c++rw + 
   XP_010101670.1 12 KGPWSPEEDEALRRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57
                     79******************************.***********985 PP

2Myb_DNA-binding54.82.2e-1766108347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++++eEd+ +++a++ +G++ W+tIar ++ gRt++ +k++w++ 
   XP_010101670.1  66 PFSPEEDDTIIRAHATYGNK-WATIARLLN-GRTDNAIKNHWNST 108
                      89******************.*********.***********986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129426.716762IPR017930Myb domain
SuperFamilySSF466891.57E-329105IPR009057Homeodomain-like
SMARTSM007172.8E-171160IPR001005SANT/Myb domain
PfamPF002496.0E-191257IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.5E-261365IPR009057Homeodomain-like
CDDcd001671.09E-161456No hitNo description
SMARTSM007172.0E-1563111IPR001005SANT/Myb domain
PROSITE profilePS5129421.09264113IPR017930Myb domain
CDDcd001671.52E-1266109No hitNo description
PfamPF002493.1E-1566108IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-2366112IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MDSTRKNLDR IKGPWSPEED EALRRLVQNY GPRNWSLISK SIPGRSGKSC RLRWCNQLSP  60
EVEHRPFSPE EDDTIIRAHA TYGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSSLSEDF  120
NGEPNDCPPL KRSASLGAGN PGSPSGSDLS DSSLPGGVSL SQVFRSVPRT GPVSPTIPQQ  180
VDTSSSAAAD PPTSLSLSLP SPDSSEVSNR NRNTAVPQAV AVPPIPEALM LRGEGSFAVE  240
GNQSGQFGYE KPFFSAEFLA VMQEMIRKEV RNYMSGIEQN GLYLHTEAVR NAVIKRIGVS  300
KIE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mse_C7e-40111133105C-Myb DNA-Binding Domain
1msf_C7e-40111133105C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010101670.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010101670.10.0transcription factor MYB44
SwissprotO231601e-93MYB73_ARATH; Transcription factor MYB73
TrEMBLW9RRL00.0W9RRL0_9ROSA; Transcription factor
STRINGXP_010101670.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84334124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.15e-75myb domain protein r1
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]