 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010101559.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
|
| Family |
C2H2 |
| Protein Properties |
Length: 175aa MW: 20670.7 Da PI: 10.2752 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010101559.1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 16.9 | 1.8e-05 | 64 | 82 | 5 | 23 |
TTTEEESSHHHHHHHHHHT CS
zf-C2H2 5 dCgksFsrksnLkrHirtH 23
+Cg sF+ + +Lk+H+++H
XP_010101559.1 64 KCGASFKKPAYLKQHMQSH 82
8****************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 175 aa
Download sequence Send
to blast |
MEEAGEKMLI FRDIRRYFCD YSGICRSKKP LIASHILTNH KDEMEKRAET EETKGLKQTN 60
TRKKCGASFK KPAYLKQHMQ SHSHEKSNLN QHVKAAYLKQ KPFACGFAGC SMRFAYKLVR 120
DSHEKTECHV YTHRDFEESD EQFRSRPRGG RKRKYPNVET LIRKRVTPQS IGWHF
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 145 | 153 | RPRGGRKRK |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Essential protein (PubMed:22353599). Isoform 1 is a transcription activator the binds both 5S rDNA and 5S rRNA and stimulates the transcription of 5S rRNA gene (PubMed:12711688, PubMed:22353599). Isoform 1 regulates 5S rRNA levels during development (PubMed:22353599). {ECO:0000269|PubMed:12711688, ECO:0000269|PubMed:22353599}. |
