PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010101195.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 187aa    MW: 21388.7 Da    PI: 8.6732
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010101195.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.6e-091465655
                    HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                    + +Er+RR ++++  ++L +l+P+  sk +sk  l+  +   +A  YI++L+
  XP_010101195.1 14 KTIERNRRIHMKDLCFKLASLVPHhHSKHYSKEmLTQQDQIDLAASYISQLR 65
                    689*********************999999999*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.28E-4669No hitNo description
PROSITE profilePS5088810.245864IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.09E-91280IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.8E-91280IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.6E-61464IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-51470IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MKKSPSETAK LDRKTIERNR RIHMKDLCFK LASLVPHHHS KHYSKEMLTQ QDQIDLAASY  60
ISQLRERIEK LKAKKEQATK SLNGSTDMSG SEVLDDHQRM RIGARLPVIE LKDLGCSIEV  120
ILISGLQKSF MLYEVISVLE EEGAEVVSAS FSTVDDKVFY TLHAQVKLSR VGVETSRVWE  180
RLQDLVY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010101195.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010101195.21e-135transcription factor bHLH162
TrEMBLW9RMU01e-134W9RMU0_9ROSA; Uncharacterized protein
STRINGXP_010101195.11e-135(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68492141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.16e-33bHLH family protein