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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010101093.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | NAC | ||||||||
Protein Properties | Length: 97aa MW: 11233 Da PI: 9.7099 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 21.8 | 5.1e-07 | 12 | 67 | 66 | 127 |
NAM 66 kkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +++ +g+r++r+t++g +t ++ ++++e +g k L ++ ++++ t+W+m ey XP_010101093.1 12 RRTLNGNRASRTTANGGFTKT---IPIENANQEIIGYKMLLNYFLAKDN---MTNWLMYEYM 67 5667999****9999977765...678888999***********55444...6********7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 13.403 | 1 | 86 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 6.67E-11 | 10 | 86 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence Send to blast |
MGIPDMIPWA NRRTLNGNRA SRTTANGGFT KTIPIENANQ EIIGYKMLLN YFLAKDNMTN 60 WLMYEYMTSS GSQKMDEFVL CKVYAKKKNE EKLQLIQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010101093.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024024400.1 | 2e-22 | NAC transcription factor 29 | ||||
TrEMBL | W9REI2 | 2e-66 | W9REI2_9ROSA; NAC domain-containing protein 68 | ||||
STRING | XP_010101093.1 | 4e-67 | (Morus notabilis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 9e-10 | NAC family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 21390733 |