PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010101086.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 297aa    MW: 34800.5 Da    PI: 6.9002
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010101086.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM93.24.2e-2941371127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknra..........tksgyWk 84 
                     lp G+rF Ptdeel+++yL++k+ + +l   +++ke+d+y++ P +L+ k  +++e+e+yfF+kr  +++t +r++r+          ++ g+Wk
  XP_010101086.1   4 LPLGYRFVPTDEELITYYLRRKIMNLPLLS-NTVKELDLYHHTPDQLQgKYGAHRENEMYFFTKRTLNTPTATRPSRTitnvdpngtiINVGFWK 97 
                     699************************877.78**************94444457779*******************77888888887779**** PP

             NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                      + k+k++ ++++e++g k  +  +     kg+ t+W+m ey+
  XP_010101086.1  98 CSTKKKAIQNADKEVIGYKMLFNHF---VAKGNMTTWLMYEYT 137
                     *******************999988...678889********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.24E-352177IPR003441NAC domain
PROSITE profilePS5100533.914177IPR003441NAC domain
PfamPF023656.8E-175137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MENLPLGYRF VPTDEELITY YLRRKIMNLP LLSNTVKELD LYHHTPDQLQ GKYGAHRENE  60
MYFFTKRTLN TPTATRPSRT ITNVDPNGTI INVGFWKCST KKKAIQNADK EVIGYKMLFN  120
HFVAKGNMTT WLMYEYTTLS GSRMAHYLKQ IVLARMVINS YIFPQMDEFV LCKIYNKNNE  180
QKHKLNAQRE KPQRSMEPQA HQVAEHVEIA RINYTEEPNV CDYRPPEEQA PTYQYCNSDI  240
ADAPMNAADP CNQQYLTPFD DNFDLFIQSL EAEIPTHDDL QFDADLHRHK IRRLSSC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-19318014171Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010101086.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024024400.10.0NAC transcription factor 29
TrEMBLW9RMJ60.0W9RMJ6_9ROSA; NAC domain-containing protein 102
STRINGXP_010101086.10.0(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63790.12e-27NAC domain containing protein 102