PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010100977.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 421aa    MW: 46372.9 Da    PI: 6.7245
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010100977.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY331.2e-10213233222
                     --SS-EEEEEEE--TT-SS-E CS
            WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                     +Dgy+WrKYGqK vk+s++p 
  XP_010100977.1 213 EDGYRWRKYGQKAVKNSPYPS 233
                     8******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.2E-12197233IPR003657WRKY domain
SuperFamilySSF1182901.01E-8204233IPR003657WRKY domain
PROSITE profilePS5081113.402207276IPR003657WRKY domain
SMARTSM007743.7E-4212245IPR003657WRKY domain
PfamPF031061.4E-6213233IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MSDHEPLYKD LYYGHDQLFQ VDQEYLTSSS KLSTSNMSSS SSTPYNLQGF DVIPTSYMSF  60
TECLQGSSMD YNSLITSTAF GLSPSSSEVF SSIEVNDHQK PLDHHHHHHP SLGDHLGSNS  120
SSDQNPVTAR DHSNSISSSS TEAGAEEDSP GKKDGKPKES LEDGEDDPKK TYFDLDHMNG  180
MINRGKAKKK GDNKRQKEPR FAFMTKSEVD HLEDGYRWRK YGQKAVKNSP YPSLSHSHHF  240
MLCAQKLLSL HHSKMRRQET RREIFSGSVH SDNDVRRPAQ PPHPVRTPRK RGYGWGGGGG  300
PAPPGEPAPG AAAPAAAAMF PPNMFGPTSS TTMAGGGGLF SSGQELLFQM PHQFPYNNII  360
MSSTNNQGGS SSPAAAIYGQ NANSRDHKQY YDGDHQMQGD HDDAYGLLQD MVPSMFLKQE  420
P
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010100977.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2297716e-45KP229771.1 UNVERIFIED: Boehmeria nivea WRKY transcription factor-like (WRKY42) mRNA, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024024334.11e-108probable WRKY transcription factor 28
TrEMBLW9REB70.0W9REB7_9ROSA; Putative WRKY transcription factor 28
STRINGXP_010100977.10.0(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.14e-24WRKY DNA-binding protein 28