PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010100844.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 484aa    MW: 53834.6 Da    PI: 9.1818
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010100844.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.11.8e-33198254360
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     DgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh+k
  XP_010100844.1 198 DGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHSK 254
                     9***************************************.***************85 PP
2WRKY105.33.2e-33389445359
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     Dg++WrKYGqK+vkgs++prsYYrCts +C+v+k+ver+++dp+++++tYeg+Hnh+
  XP_010100844.1 389 DGFRWRKYGQKVVKGSPYPRSYYRCTSLKCNVRKHVERASDDPRAFITTYEGRHNHD 445
                     9*******************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-29194255IPR003657WRKY domain
SuperFamilySSF1182903.66E-26195255IPR003657WRKY domain
SMARTSM007748.2E-38196254IPR003657WRKY domain
PfamPF031065.6E-26198252IPR003657WRKY domain
PROSITE profilePS5081123.456198255IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.6E-34372447IPR003657WRKY domain
PROSITE profilePS5081134.934382447IPR003657WRKY domain
SuperFamilySSF1182902.35E-28382447IPR003657WRKY domain
SMARTSM007744.0E-39387446IPR003657WRKY domain
PfamPF031064.2E-26389445IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MDVKEAERTV IAKPVASRPS SSSFRSFTEL LAGAINATPS NTSSETAVPA IRPKTVRFKP  60
VVHRTAAGLI SSQVEISGAA VCNPSDKSSK PDGKLTVVHK PLAKVVSKTT VSLLANMGNF  120
NNTNQPIQSS FEPQVQYPYQ DKHTFRSQMS SSPHQNFPSR AETSQRTETS KMVSTSENHE  180
EDLRSLPSMG IGDRPSYDGY NWRKYGQKQV KGSEFPRSYY KCTHPNCPVK KKVERSLDGQ  240
IAEIVYKGEH NHSKPQPPKR GSHGTQGLGL GSDTTGQDTN SQLWNSQLNE RIEGFEGRLD  300
NQNETLSLQS YQSRAQQPHD SLPTVADNSR GPSVEPEEES KGLEAEDDEP KSKRRKGENQ  360
SSEAGTSGEA MQESQVVVQN SSDPEISGDG FRWRKYGQKV VKGSPYPRSY YRCTSLKCNV  420
RKHVERASDD PRAFITTYEG RHNHDMPIRN HTQIQCPLTR AHRPLLVKTD HMIDTLEHTT  480
LANS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-31198447877Probable WRKY transcription factor 4
2lex_A6e-31198447877Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010100844.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2297513e-59KP229751.1 UNVERIFIED: Boehmeria nivea WRKY transcription factor-like (WRKY22) mRNA, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010100844.10.0WRKY transcription factor 44 isoform X1
TrEMBLW9RLV80.0W9RLV8_9ROSA; WRKY transcription factor 44
STRINGXP_010100844.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67903450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.11e-101WRKY family protein