PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010100794.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 554aa    MW: 60519.8 Da    PI: 7.0439
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010100794.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.7e-09352399455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_010100794.1 352 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 399
                     8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.95E-17346416IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.08E-10346403No hitNo description
PROSITE profilePS5088815.663348398IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.7E-17348417IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-6352399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10354404IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    Send to blast
MENEYFFLNA GIAPLLHLES SNPIPNWQQQ QQSQMELKLN SSSDGSPDQC FYNNPSREKS  60
TDQQSMQFDS ALSSMVSSPV ASNSNISNDS FVIRELIGKL GNIGNNNNVK NSSSGEISLA  120
NTSCYSTPLN SPPKMMNCNL GRKPSSLNSS VAEFAADPGF AERAARFSCF GSRSFNGRTT  180
QFGFNNSNEF NNNTNNNNIP GGSNSSPLTG NGNKMSRVSS SPALKALGSQ LNSNNSQEES  240
TESEQNPNGE KALKPEMNSR KRKAASKGKI LPSSSPPTTK IIEANDNSNA KRNKTTEFGE  300
GNEKSGQAKT EEEIAKGTSG GDEKQTKTSP KPPEPPKDYI HVRARRGQAT DSHSLAERVR  360
REKISERMKL LQDLVPGCNK VTGKALMLDE IINYVQSLQR QVEFLSMKLA SVNTRLDANI  420
DTLMSKDIFQ PNSSMPHPIF PLDSSAQTVY GHQPQQNQTI HNNNNNNSNN NISSGPMTHC  480
SMDPLDSALC QNLGMQLPHL NGFSDIVSQY PAFGEDDLQA IVQMGFGQNP NRDTSFQPQS  540
LHGPNQVSHM KVEL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00660PBMTransfer from Pp3c6_9520Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010100794.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010100794.10.0transcription factor bHLH78
TrEMBLW9S2P30.0W9S2P3_9ROSA; Uncharacterized protein
STRINGXP_010100794.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25303480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.13e-93bHLH family protein