PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010100723.1
Common NameDREB4A
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 208aa    MW: 22572 Da    PI: 4.5382
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010100723.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.2e-183888155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f  +e+Aaka++ a+ +l+g
  XP_010100723.1 38 PVYRGVRKRR-WGKWVSEIREPRK---KSRIWLGSFPVPEMAAKAYDVAAYCLKG 88
                    68*****887.**********843...6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.4E-123888IPR001471AP2/ERF domain
PROSITE profilePS5103223.5783996IPR001471AP2/ERF domain
SMARTSM003808.6E-3539102IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.4E-313997IPR001471AP2/ERF domain
SuperFamilySSF541714.77E-213998IPR016177DNA-binding domain
PRINTSPR003671.5E-124051IPR001471AP2/ERF domain
CDDcd000181.23E-294098No hitNo description
PRINTSPR003671.5E-127898IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MEQPPFAEDE PTASKSQQLD NSQQQQQRVG GSGGTRHPVY RGVRKRRWGK WVSEIREPRK  60
KSRIWLGSFP VPEMAAKAYD VAAYCLKGRK AQLNFPDDVD SLPRPLTSTA RDIQEAAAKA  120
AHMMAVVSSA AEKSDVTSNA SNDGGDDGGG GDDSDDFWGE IDELPEIMSG GTGEFCSWNS  180
ACGWTSVFIG DAAVWPEGEV PQPFMACL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1830100476Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00120DAPTransfer from AT1G01250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010100723.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783890.0KF678389.1 Morus notabilis dehydration responsive element binding transcription factor (DREB4A) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010100723.11e-153ethylene-responsive transcription factor ERF023
SwissprotQ1ECI22e-57ERF23_ARATH; Ethylene-responsive transcription factor ERF023
TrEMBLW6FIZ41e-152W6FIZ4_9ROSA; Dehydration responsive element binding transcription factor
STRINGXP_010100723.11e-153(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF63752847
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.11e-49ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]