PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010099638.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB
Protein Properties Length: 1731aa    MW: 189549 Da    PI: 6.2391
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010099638.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding254.4e-08818859346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +WT+eE e++ d  +  G++ +k+Ia  +  ++t  +c+++++k
   XP_010099638.1 818 PWTPEEKEIFMDKLASCGKD-FKRIAFFLE-HKTTADCVEFYYK 859
                      8*****************99.*********.***********98 PP
2Myb_DNA-binding31.34.6e-1010361076345
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding    3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45  
                        WT eE  ++v+av   G + +++I++++  +R++ qck ++ 
   XP_010099638.1 1036 DWTDEEKSIFVQAVSSCGRD-FSKISQCVR-TRSRDQCKVFFS 1076
                       5*****************77.*********.********8776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.72E-12802862IPR009057Homeodomain-like
PROSITE profilePS5129312.418814866IPR017884SANT domain
SMARTSM007177.0E-6815863IPR001005SANT/Myb domain
PfamPF002492.0E-5817859IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.3E-4818859IPR009057Homeodomain-like
PROSITE profilePS5129311.27210321083IPR017884SANT domain
SMARTSM007171.8E-810331081IPR001005SANT/Myb domain
SuperFamilySSF466891.17E-910341083IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.8E-610361077IPR009057Homeodomain-like
PfamPF002492.6E-810361076IPR001005SANT/Myb domain
CDDcd001677.77E-710371075No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1731 aa     Download sequence    Send to blast
MPPERLPWDR KDFFRERKYE RSESVGSVAR WRDSSHHGSR DLNRWGSADF RRPLGHGKQG  60
GWHFFPEESG HGYAPSRCSE KVLEDENYRS SISRREGKYG RNSRENRGSY NQREWRGHSW  120
ESNGFSNTPG RAHDLNNELK SRDEMPAYSS HSNGGFGNTW DQIQLKDQHD RIGGSNGLVT  180
GQKCDRENSL GLNDWKPIKW TRSGSLSSRG SGFSHLSSSK SVGAIDLSEA KVESQTKNVT  240
PVQSPLGDAN ACVTSAAPSD ETNSRKKPRL GWGEGLAKYE KKKVDGPEVI LNKDETVFAV  300
SNVEPSHSFS SNLVDKSPRV TSFSDCASPA TPSSVACSSS PVFQKVPYLI KGAIFDPFLA  360
GVEEKSFGKA ANSDNDISNL CGSPGPVAQN PCEGSPFNLE KLDFSSVANL GPSLTELLQL  420
DDPNSMDSSF VRSTAMNKLL ILKGEISKTL EVTESEIDSL ENELKSLNSI PRSSSPSASS  480
SLPLENKLKS SEDLDITNSV PRPALLHIVS SRDAVVEEIP ICNGREEEIR TNNKDEDVDS  540
PGTVTSKFVE PLSLAKKVSS FDMLNHVAED LNHNQLLNKE VQCAVHSGGG KTGPSTYADD  600
GILTEVETIA PISNCMGSCT EGEDMLHGAI LLCNKELAKT AHEVFKKLLP KVDVKLDFCR  660
FDSASSSQHH TLVKDKFAMR KRFLKFKERV ITMKFKAFQH LWKEDMRLLS IRKYRAKSQK  720
KFELSLRSVH NGYQKHRSSI RSRFSSPAGN LSLVPTTEII NFASQLLSDP QVKIYRNSLK  780
MPALILDKKE KIMSRFISSN GLVEDPLAVE KERALINPWT PEEKEIFMDK LASCGKDFKR  840
IAFFLEHKTT ADCVEFYYKN HKFACFEKTK KLDIGKQEKS LSNASYLIPS GKKWNRERNA  900
ASLDILGAAS AMAANADANM RSRQTCSGRL ILGGFSEFKA SWGDDGMVER SCNFDVLGNE  960
RETVAAHVLA GICGSLSSEA MSSCITSSVD RVEGYQEWKS QKVDSVLRRP LTPDVTQNVD  1020
DETCSDESCG EMDPTDWTDE EKSIFVQAVS SCGRDFSKIS QCVRTRSRDQ CKVFFSKARK  1080
CLGLDLIHPG LGSERTSLGD DANGSGSGSE NACAPETGSG ICSDKSGSKM DEDLPLPTMT  1140
MNLDESDPIE TLNSPNTVSR SEGENERELL DHKQNARTSE SHGSDACQTQ GRPNVVSDGD  1200
SNITNGVDEQ SETLPLRESE SVLVTMDAEM KNVAQQGTSV AESVSVCEGN DPESLNVGSV  1260
AGIKPVAEVS SDGPGKKVEE GLNEKGIAST SGQSGLSNID GNVSNLAADR SSSSGFNLNP  1320
DFPYQVSVEL NSKDKSCATS LLQETSLASA NSISLDSRAI PCEKNGNEGK TPSTLDFQES  1380
KDVCHKSVST DEPHGHLTGL PLSSNSESSH VLRAYSLQLP VKKEMNGEVR CRNLSEVQNL  1440
PNSDGSSSNH FVSQGCYLQK CSTLKPPCSV TENGGDVKLF GKILSNPLSV HNHCENEENE  1500
GSHEHNSSNK PSNTKFINLH NLDGSSAILK FDRNNYLGLD NVQMRSYTYW DGNRLQAAFP  1560
SLPDSAILLA KYPAAFSNFP TSSKMEQQQQ LQAVAKSNER NVNGVSVFPT RDISSSNGMV  1620
DYQVYRSRDA PMVQPFTVDV KPRQDMFSEM QRRNGIEALA NFQHQGMGMV GMNVVGRGGG  1680
IVVGNGACTT GVSDPVAALK LHFAKTDQYG GQSSSIIRED ESWRGKGDIG R
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4a69_C2e-14781862989NUCLEAR RECEPTOR COREPRESSOR 2
4a69_D2e-14781862989NUCLEAR RECEPTOR COREPRESSOR 2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010099638.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024023460.10.0uncharacterized protein LOC21396603 isoform X1
TrEMBLW9RZE40.0W9RZE4_9ROSA; Nuclear receptor corepressor 1
STRINGXP_010099638.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49863352
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52250.11e-116MYB family protein