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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010099501.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | bZIP | ||||||||
Protein Properties | Length: 339aa MW: 36925.1 Da PI: 7.0204 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.7 | 8.2e-11 | 204 | 247 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L + XP_010099501.1 204 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 247 899*********************************98877655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.4E-14 | 200 | 264 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 1.6E-9 | 201 | 249 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.622 | 202 | 254 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.8E-11 | 204 | 255 | No hit | No description |
SuperFamily | SSF57959 | 4.26E-11 | 204 | 258 | No hit | No description |
CDD | cd14703 | 1.25E-22 | 205 | 255 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 207 | 222 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence Send to blast |
MAQLPPKIPN MSPNWPDVLS HQKLPSLASF GPTANGGGGG GATNPSWVDE FLDFSTARRG 60 SHRRSVSDSI TFLETPMLDE CRSASGAAAA GQGGLLPGTN QGVEFDRFDD EQFMSMFNDE 120 IASMGAGAAG PTLSSSSPSS PSDHNSINDE KEMQLDRNNC GKPHVIKNES EEVESQCKSD 180 GAQAIANTAA AATTMNADRI SDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQAE 240 VSVLSPRVAF LDHQRLLLNV DNSALKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ 300 NLKKMENANS QSPSPNTPTG DHAKSPNIDR KEHLLNVTS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010099501.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010099501.1 | 0.0 | basic leucine zipper 61 isoform X2 | ||||
Swissprot | Q9M2K4 | 1e-120 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | W9RA57 | 0.0 | W9RA57_9ROSA; Transcription factor VIP1 | ||||
STRING | XP_010099501.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2011 | 34 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 1e-110 | bZIP family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 21385051 |
Publications ? help Back to Top | |||
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