PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010099295.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

bHLH

Protein Properties

Length: 1062aa MW: 118943 Da PI: 6.5753

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010099295.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.1	3.2e-08	702	734	19	55
HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 f++Lr+l+P++ ++K +Ka+ L +++eYI+ Lq XP_010099295.1 702 LFQTLRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 734 79*******9....9*****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF10250	1.3E-42	102	398	IPR019378	GDP-fucose protein O-fucosyltransferase
PROSITE profile	PS50888	11.23	683	733	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.31E-9	700	751	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	6.69E-7	701	737	No hit	No description
Pfam	PF00010	1.1E-5	701	734	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.3E-11	703	752	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005768	Cellular Component	endosome
GO:0005802	Cellular Component	trans-Golgi network
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 1062 aa Download sequence Send to blast
MKGEGKMVFM SKMKWVGLVG LFLSAISLFV HFLLARFTFG GISEYQSTIT IFSRRSSIAQ 60 DFSTTSRLYK RLWGPVRRLE SVHPDANPRQ YYADPTSHTN GFIFVRIQGG FHEIRNSISD 120 VVVVARFLNA SLVIPEILST TSSKGISSQF KSFAYLYNED EFMATLAKDV IVVKTLPKHL 180 KGERRKKNIP VFKVPFAASP YYYQHHVLPV LKKHLVVELV VSEGGCLQAI LPPDLEEYQR 240 LRCRVAFHAL QFRQEVQELA NKILHRLRDP GLPFIAFDPG MTRDALAYYG CAELFQDVHT 300 ELIQHKRAWM IKRGIVKGRL SVNSANKRLN GSCPLMPEEV GILLRAYGYS WDTIIYVSGG 360 EIFGGQRTLI PLRGIFENVV DRTALSTPWE ITQLYGREAN LEDNYHQSPP SIEKEMKTEA 420 WKNAGPRPRP LPPPPARPKS YNIEGWWGWV AESDNEPEST VIELRTNAHK LLWEAIDYAI 480 CVEADVFIPG FDRDGKGHPN FASLVMGHRL YQSAALKTYR PDRKEVVKLL EDIRGHLYHA 540 NHTWLTSVRK HLTKTLVDGL LEASRKSKSK SFISHPVPEC TCLKHDSSET TTRVSSPTTS 600 QLLASLGVVH RCPVWMDSDL TLRSKDKENE EDFDEDDSTL SGLFFTQDDR SHEGGGAVEL 660 NNKDEAQLED QDELEDNFQE TTAKGQPSEP AHRNPRLEAH HLFQTLRDLI PQNDQKRDKA 720 SFLLEVIEYI QFLQEKLNMY EGSLHGWSSE PRKLIPWKNE HVLTEGFSDP GQVMKNGSDL 780 QNNVVVSPSM LPNSQNSPES DMGSAMVYKT MDHLAGSAIQ AAPLNVQHTS MFDPIGRRVV 840 PLQPSQESDV VHVDPLPQPQ SVSWQSGHST ACSVLNNTSC IQEEKCGSAS ISNSYSQGVL 900 DTLTQALQSS GVDLSRTSIS VQIDVANRTD SGLTFLASSS KDHVNRSLDN QLTANPQNVK 960 EGQFPTNEFI THESQTQVTD EPANLSRSGR SGGHGRNGGG CGGEASASIT ASVASSKWKC 1020 KHNATVRDHF DTIEEVDNDD RMEVAQMIVA LDQPLSFVEH LN

Sequence ? help Back to Top

Protein Sequence Length: 1062 aa Download sequence Send to blast

MKGEGKMVFM SKMKWVGLVG LFLSAISLFV HFLLARFTFG GISEYQSTIT IFSRRSSIAQ  60
DFSTTSRLYK RLWGPVRRLE SVHPDANPRQ YYADPTSHTN GFIFVRIQGG FHEIRNSISD  120
VVVVARFLNA SLVIPEILST TSSKGISSQF KSFAYLYNED EFMATLAKDV IVVKTLPKHL  180
KGERRKKNIP VFKVPFAASP YYYQHHVLPV LKKHLVVELV VSEGGCLQAI LPPDLEEYQR  240
LRCRVAFHAL QFRQEVQELA NKILHRLRDP GLPFIAFDPG MTRDALAYYG CAELFQDVHT  300
ELIQHKRAWM IKRGIVKGRL SVNSANKRLN GSCPLMPEEV GILLRAYGYS WDTIIYVSGG  360
EIFGGQRTLI PLRGIFENVV DRTALSTPWE ITQLYGREAN LEDNYHQSPP SIEKEMKTEA  420
WKNAGPRPRP LPPPPARPKS YNIEGWWGWV AESDNEPEST VIELRTNAHK LLWEAIDYAI  480
CVEADVFIPG FDRDGKGHPN FASLVMGHRL YQSAALKTYR PDRKEVVKLL EDIRGHLYHA  540
NHTWLTSVRK HLTKTLVDGL LEASRKSKSK SFISHPVPEC TCLKHDSSET TTRVSSPTTS  600
QLLASLGVVH RCPVWMDSDL TLRSKDKENE EDFDEDDSTL SGLFFTQDDR SHEGGGAVEL  660
NNKDEAQLED QDELEDNFQE TTAKGQPSEP AHRNPRLEAH HLFQTLRDLI PQNDQKRDKA  720
SFLLEVIEYI QFLQEKLNMY EGSLHGWSSE PRKLIPWKNE HVLTEGFSDP GQVMKNGSDL  780
QNNVVVSPSM LPNSQNSPES DMGSAMVYKT MDHLAGSAIQ AAPLNVQHTS MFDPIGRRVV  840
PLQPSQESDV VHVDPLPQPQ SVSWQSGHST ACSVLNNTSC IQEEKCGSAS ISNSYSQGVL  900
DTLTQALQSS GVDLSRTSIS VQIDVANRTD SGLTFLASSS KDHVNRSLDN QLTANPQNVK  960
EGQFPTNEFI THESQTQVTD EPANLSRSGR SGGHGRNGGG CGGEASASIT ASVASSKWKC  1020
KHNATVRDHF DTIEEVDNDD RMEVAQMIVA LDQPLSFVEH LN

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010099295.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024023280.1	0.0	O-fucosyltransferase 27
Swissprot	Q8GZ81	0.0	OFT27_ARATH; O-fucosyltransferase 27
TrEMBL	W9R9I6	0.0	W9R9I6_9ROSA; Uncharacterized protein
STRING	XP_010099295.1	0.0	(Morus notabilis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	3e-38	BES1-interacting Myc-like protein 2

Link Out ? help Back to Top
Entrez Gene	21401134

Publications ? help Back to Top
Hansen SF,Harholt J,Oikawa A,Scheller HV Plant Glycosyltransferases Beyond CAZy: A Perspective on DUF Families. Front Plant Sci, 2012. 3: p. 59 [PMID:22629278] Neumetzler L, et al. The FRIABLE1 gene product affects cell adhesion in Arabidopsis. PLoS ONE, 2012. 7(8): p. e42914 [PMID:22916179] Wang Y,Mortimer JC,Davis J,Dupree P,Keegstra K Identification of an additional protein involved in mannan biosynthesis. Plant J., 2013. 73(1): p. 105-17 [PMID:22966747] Voxeur A,André A,Breton C,Lerouge P Identification of putative rhamnogalacturonan-II specific glycosyltransferases in Arabidopsis using a combination of bioinformatics approaches. PLoS ONE, 2012. 7(12): p. e51129 [PMID:23272088]