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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010098999.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | bHLH | ||||||||
Protein Properties | Length: 121aa MW: 14032.6 Da PI: 9.7215 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.4 | 0.0003 | 95 | 115 | 9 | 29 |
HHHHHHHHHHHHHHHHCTSCC CS HLH 9 ErrRRdriNsafeeLrellPk 29 E+ +++N+ +++Lr++lP+ XP_010098999.1 95 EKDQLRKLNQMIDKLRTHLPP 115 777789**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence Send to blast |
MVQNNFVPKT RTVVVLMKLF CANSRVDLGL HLWEYLMGKG YCPHGHALEL LLTGLCSRGF 60 VKEAFECSKQ VLERGRHLSE AAFRLIERRL LQEGEKDQLR KLNQMIDKLR THLPPITEKM 120 L |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010098999.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010099000.2 | 6e-82 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g61360 | ||||
Swissprot | Q9M2C8 | 1e-33 | PP291_ARATH; Pentatricopeptide repeat-containing protein At3g61360 | ||||
TrEMBL | W9R8Z5 | 5e-84 | W9R8Z5_9ROSA; Uncharacterized protein | ||||
STRING | XP_010098999.1 | 9e-85 | (Morus notabilis) |
Link Out ? help Back to Top | |
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Entrez Gene | 21408345 |
Publications ? help Back to Top | |||
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