PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098516.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 502aa    MW: 53819 Da    PI: 6.287
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098516.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.2e-30261319259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp+++++tY++eHnh+
  XP_010098516.1 261 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVVTYTSEHNHP 319
                     699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.6E-31254321IPR003657WRKY domain
PROSITE profilePS5081133.27255321IPR003657WRKY domain
SuperFamilySSF1182902.75E-26258321IPR003657WRKY domain
SMARTSM007741.8E-37260320IPR003657WRKY domain
PfamPF031069.1E-26262319IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    Send to blast
MDHNFQGDLT DILRASGSTS AGPSSVNSGY GELGLPNITD DNNNSNWQFP SDLPLNFPSI  60
SSMEDLPRDS FGDPFSNMRD PLFHELSDVP PGPAFFGSPN SENIISDGGG GGGGFGEMLG  120
PSHHHHHVGL DHHHQEDVKF RPSCNIFSRM LQINPSGKLP AATAAAAGAT TSSPQCDSAA  180
NMATAASPRG IKAAAVISGD MINVNSSQQG CLVENNTGSG MQISSPRNPG IKRRKSQAKK  240
VVCIPAPAAA NSRASGEVVP SDLWAWRKYG QKPIKGSPYP RGYYRCSSSK GCSARKQVER  300
SRTDPNMLVV TYTSEHNHPW PTQRNALAGS TRSQPSKNNN NNATIIKNSP INSHLHQKNN  360
NNDNVTASTT SPKEEQKDHQ IIISNNVENN NNGSTSTTSA SMKEEVDQDV IEKQLDSLDD  420
SAFIYTAPPS EVGFGYRPAM PGSNHDQDSF FADLGEIEAD PLNLLFGQAG FSSSSSSAAD  480
HDHQHKGMMM SNKGLDPFNL FD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-25235322280Disease resistance protein RRS1
5w3x_D1e-25235322280Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098516.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2297641e-126KP229764.1 UNVERIFIED: Boehmeria nivea WRKY transcription factor-like (WRKY35) mRNA, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010098516.20.0probable WRKY transcription factor 35
TrEMBLW9R7G30.0W9R7G3_9ROSA; Putative WRKY transcription factor 35
STRINGXP_010098516.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54303454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.11e-85WRKY DNA-binding protein 35