PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098118.1
Common NameDREB4F
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 267aa    MW: 28513.7 Da    PI: 5.1898
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098118.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.2e-1773121355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr ++ +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a++ ++g
  XP_010098118.1  73 YRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFSNPEMAARAHDVAALTIKG 121
                     9****998.**********843...6**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.6E-3172130IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-2072130IPR016177DNA-binding domain
PROSITE profilePS5103222.74872129IPR001471AP2/ERF domain
SMARTSM003801.4E-3472135IPR001471AP2/ERF domain
PRINTSPR003671.5E-97384IPR001471AP2/ERF domain
PfamPF008471.1E-1073121IPR001471AP2/ERF domain
CDDcd000181.21E-3173131No hitNo description
PRINTSPR003671.5E-995111IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MTETKNNSSE PESSTSANSS PSSSSPSSST TPLSSSGMFQ KVKKKKKASS LKTVRERECS  60
KQSPVSKKSP VMYRGVRMRS WGKWVSEIRE PRKKSRIWLG TFSNPEMAAR AHDVAALTIK  120
GASAILNFPD LAHSLPRPAS LAPRDIQAAA AKAAALADVD LTTTSSPSTS SSSSSSSNHS  180
EDQSEELGEI VELPNIEGTF DSPESAGISE FMLVDSVDSW VYPPLEVELG VGGGQFYGEF  240
FSDQILAAES LVPSDTSTIE GLVLWTS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-17731291572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcriptional activator.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098118.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Slightly induced by cold stress. {ECO:0000269|PubMed:11798174}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783840.0KF678384.1 Morus notabilis dehydration responsive element binding transcription factor (DREB4F) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010098118.10.0ethylene-responsive transcription factor TINY
SwissprotQ391271e-57TINY_ARATH; Ethylene-responsive transcription factor TINY
TrEMBLW6FIZ00.0W6FIZ0_9ROSA; Dehydration responsive element binding transcription factor
STRINGXP_010098118.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.12e-50ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]