PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097277.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 571aa    MW: 62222.7 Da    PI: 7.309
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097277.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.16.8e-32216273260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk  ers+ d++++ei+Y+g+H+h+k
  XP_010097277.1 216 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 273
                     8****************************************.***************85 PP
2WRKY106.21.6e-33388446159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  XP_010097277.1 388 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 446
                     59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182908.37E-25214274IPR003657WRKY domain
SMARTSM007744.1E-34215273IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.8E-27215274IPR003657WRKY domain
PfamPF031061.7E-24216272IPR003657WRKY domain
PROSITE profilePS5081122.791216274IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-37373448IPR003657WRKY domain
SuperFamilySSF1182902.22E-29380448IPR003657WRKY domain
PROSITE profilePS5081138.825383448IPR003657WRKY domain
SMARTSM007743.1E-39388447IPR003657WRKY domain
PfamPF031063.4E-26389446IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    Send to blast
MADEKVRRRS SDEVDPRTAE LHDQFGGGGG GAKYKLLSPA KLPISRSPCL TIPPGLSPSS  60
FLESPVLLSN MKAEPSPTTG SFFKAQMAQG SATYSATAVC SNISTSDIMN SSSFEFKPHA  120
TSNMVTTDPN YKRSDQSMQV QVQSRSLVSV PSVKSEMTAT SNELSLLAPV SIATSGASAP  180
ADGDSDELNR RGHPNSGVQT AQFDNKGSGP SVISSDDGYN WRKYGQKHVK GSEFPRSYYK  240
CTHPNCEVKK LFERSHDGQI TEIIYKGTHD HPKPQPSRRY NPGSIMSSQE ERSDKFLAIT  300
GREDKSQNVY GQTSNTNDPN GTPDQSPIAT NDDSGDATGN RIHDDIDDDD PFSKRRKMDI  360
GSLDITPVVK PIREPRVVVQ TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTNAGCP  420
VRKHVERASH DPKAVITTYE GKHNHDVPTA RNSSHDMAGS MAASVPARIR PEETDTISLD  480
LGVGISSAAE NRSNEHLPTT HSELVQSQAH NSSLNVVQAG QVPAFYGILS NNLNQFGSRE  540
NLGEGRSIQI PSLNHSSYPY PQNMGRILTG P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-37195448577Probable WRKY transcription factor 4
2lex_A6e-37195448577Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010097277.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097277.10.0probable WRKY transcription factor 20
SwissprotQ93WV00.0WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLW9RSK20.0W9RSK2_9ROSA; Putative WRKY transcription factor 20
STRINGXP_010097277.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39463463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.20.0WRKY family protein