PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010096644.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 257aa    MW: 29795.6 Da    PI: 9.2358
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010096644.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.91.1e-051772161155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     rR +++ +++  L++l+ +      +K + a++L++A  YIk Lq
  XP_010096644.1 177 RRSQKLTDKITALQKLVSPY-----GKTDTASVLQEASLYIKLLQ 216
                     7999**************99.....9****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.877166215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.78E-5177220No hitNo description
SuperFamilySSF474596.8E-9177225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-7177224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MRNPAILPFV SPNYEFGNIN YELQTWNENL HNMSSGFCLE PKFLDNHENQ QRVENYSFPS  60
FQSSLVTYQP VFPSSVFSSC DLDNTSHHQS MLLGKKILAS QLDMAIRNAR KRPIEVNNDI  120
FAKSGISELL SDRTTLNEWG KNKRSKVTGN NQQWQHQVMR ETLTGMHEHK VQELPVRRSQ  180
KLTDKITALQ KLVSPYGKTD TASVLQEASL YIKLLQEQIQ NLFRMLSSSY DSSVRSLPHS  240
QKVTIDQERI DHKYQRY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010096644.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024021534.11e-180uncharacterized protein LOC21408094
TrEMBLW9R2F80.0W9R2F8_9ROSA; Uncharacterized protein
STRINGXP_010096644.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF133551522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05170.12e-14bHLH family protein