PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010096585.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family GRAS
Protein Properties Length: 685aa    MW: 77208 Da    PI: 5.3925
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010096585.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS391.21.1e-1193126821373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+ v+++d + a++lL+++++++sp+gd mqRla++f+ +L+ar+a+s++++ykal +++ts    +++l+a++l+  ++P+ k+s+
  XP_010096585.1 312 LRTLLTLCAHSVAADDRRSAEKLLKQIRQHSSPTGDGMQRLAQCFADGLEARMAGSGTQVYKALIAKPTS---AADVLKAYHLLLAACPFKKLSN 403
                     5789****************************************************************99...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +  N++I++ +e+++r+HiiDf+i +G+QWp+L+q L+sR+egpp+lRiTg++ p++g   +e++eetg+rLa++Ae+++vpfefn+ +a+++++
  XP_010096585.1 404 FFSNKTIMNVAEKATRLHIIDFGILYGFQWPCLIQRLSSRSEGPPKLRITGIDFPQPGfrPAERVEETGRRLANYAETFKVPFEFNA-IAQKWDT 497
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L+++p+E+++Vn++++l +llde+v ++s+rd vL+l+++++P+v+++   +  ++++ F +rf eal ++s+lfd+le+++pre  e +
  XP_010096585.1 498 IQIEDLKLDPDEVIVVNCMYRLRNLLDETVVVDSPRDIVLNLIRKMNPDVFIMGAVNGAYSAPFFITRFREALFHFSTLFDMLETNVPREIPESM 592
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      +Ere+++re++nv+aceg+er+er et+++W+ r  +aGF+++pl++++++ ak  ++ ++ + + ++ + ++l++gWk+r ++++S+W
  XP_010096585.1 593 LIEREIIRREAMNVIACEGSERIERPETYKQWQVRNLRAGFRQLPLNQEIMQVAKDRVKSYYHKDFVIDRDGQWLLQGWKGRIVYALSSW 682
                     **************************************************************888************************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098568.648286663IPR005202Transcription factor GRAS
PfamPF035143.8E-117312682IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 685 aa     Download sequence    Send to blast
MHLHRDLAPN PEVGDAHEDF DFSDVVLKYI SQMLMEEDME DKTCMFQESA ALQAQEQSFY  60
ELIGNKYPSQ DDDPTVPCAD QKHDSPDGSL ALQDSSCSIS NSTSSSASVV DPGWNFDPGD  120
YKSPQQVASQ SSYGSSNEAG NFVDGFVDSP MSTLRVHEAF NEIESVMQFK RGFEEASKFI  180
PNAESLIVDL EGYKFFSKEL KDSKDVTVDV EKKYESEYFL DGSRGKKHPH REDVAVEEGR  240
SNKQSAFCSE SNVSSDMFDM VLLNCGKNDS SLREALQNGA SKNSQQNGQS KGTNGGKARG  300
KKQGGKRDVV DLRTLLTLCA HSVAADDRRS AEKLLKQIRQ HSSPTGDGMQ RLAQCFADGL  360
EARMAGSGTQ VYKALIAKPT SAADVLKAYH LLLAACPFKK LSNFFSNKTI MNVAEKATRL  420
HIIDFGILYG FQWPCLIQRL SSRSEGPPKL RITGIDFPQP GFRPAERVEE TGRRLANYAE  480
TFKVPFEFNA IAQKWDTIQI EDLKLDPDEV IVVNCMYRLR NLLDETVVVD SPRDIVLNLI  540
RKMNPDVFIM GAVNGAYSAP FFITRFREAL FHFSTLFDML ETNVPREIPE SMLIEREIIR  600
REAMNVIACE GSERIERPET YKQWQVRNLR AGFRQLPLNQ EIMQVAKDRV KSYYHKDFVI  660
DRDGQWLLQG WKGRIVYALS SWNAA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A4e-473126825374GRAS family transcription factor containing protein, expressed
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010096585.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024021541.10.0scarecrow-like protein 9
SwissprotO809330.0SCL9_ARATH; Scarecrow-like protein 9
TrEMBLW9RQL50.0W9RQL5_9ROSA; Uncharacterized protein
STRINGXP_010096585.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13134339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein