PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010096209.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | bZIP | ||||||||
Protein Properties | Length: 344aa MW: 37538.8 Da PI: 9.0157 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.6 | 7.1e-10 | 231 | 290 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 k+e++k + Re+A r +RK++eie L+e +++L+ eN++Lk+++ ++++e++++ e+ XP_010096209.1 231 EKKEKKKKSKRESAARAKLRKQEEIESLREIAEKLKRENSKLKNKILQISEECQEVGEEN 290 69****************************************************998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-6 | 224 | 285 | No hit | No description |
SMART | SM00338 | 2.2E-5 | 228 | 292 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.059 | 230 | 293 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.6E-8 | 231 | 287 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence Send to blast |
MATQEAARIN DPSRLMAARK ATAPANTFKS RVLTQGSHRL KAAEPSTFLS GAAVSSNLYP 60 LMTGDQKQLM QAYAVAPGGS PAPCDQKQIN GSLHLILIGA YEKDLKSAKK CKEGSGNEIV 120 GDSRLRNTGD VTSPSGSTGI KDSVAETARA NQDSSAKFYK RKYFSAKPQR LDSTPLHAAV 180 AQSGETLNDH GVNTDMLLRD SETNTVETKN LGSTLSRHGT KSIITKEKLE EKKEKKKKSK 240 RESAARAKLR KQEEIESLRE IAEKLKRENS KLKNKILQIS EECQEVGEEN DSLMDEVEGR 300 YGADAISDIR ARNPASANQE SHGDGERTLS DNNSTDDRNG EMDQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010096209.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024021309.1 | 1e-160 | uncharacterized protein LOC112090253 | ||||
TrEMBL | W9RBL5 | 0.0 | W9RBL5_9ROSA; G-box-binding factor 1 | ||||
STRING | XP_010096209.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15757 | 7 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36730.2 | 7e-07 | G-box binding factor 1 |
Link Out ? help Back to Top | |
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Entrez Gene | 21409577 |