PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010095898.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 302aa    MW: 32580.6 Da    PI: 6.2817
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010095898.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.71e-13191236655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++Le+AveY+k+Lq
  XP_010095898.1 191 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVEYVKYLQ 236
                     689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.869185235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-16188246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.45E-13189240No hitNo description
Gene3DG3DSA:4.10.280.107.2E-16190244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.9E-11191236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-13191241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042335Biological Processcuticle development
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MQPAPGGSSG GGGGVSRTGL SRFRSAPATW LEALLEDEEE DPLKPNQCLT QLLTENSSSA  60
ATTRIASVNP FGTTSSPAAA DLSSFDAAGF LRQNSSPADF LGDGLFSGFD AGPASSAFDL  120
AAPGNLSSGS KRARDVEAAQ QFSSPKLSNP IKLEQGGQAS GLIDMEMEKL LDDSVPCRVR  180
AKRGCATHPR SIAERVRRTR ISDRIRKLQE LVPNMDKQTN TADMLEEAVE YVKYLQRQIQ  240
QSLQHFWSKT LEQNCPRITQ ACKWPPSDLT QIPLYATQVS SPLSILSPHY VPLNPSTLSC  300
LL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00181DAPTransfer from AT1G35460Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010095898.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024021064.11e-175transcription factor bHLH81
RefseqXP_024021065.11e-175transcription factor bHLH81
RefseqXP_024021066.11e-175transcription factor bHLH81
SwissprotQ9C8P81e-73BH080_ARATH; Transcription factor bHLH80
TrEMBLW9R8H20.0W9R8H2_9ROSA; Uncharacterized protein
STRINGXP_010095898.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91323043
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.17e-65bHLH family protein