PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010095789.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 364aa    MW: 40696.2 Da    PI: 5.1573
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010095789.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.72.3e-28121181259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK++ g+++pr+YYrCt +   gC ++k+v+rs++d +++e+tY+g+H+++
  XP_010095789.1 121 EDGYSWRKYGQKDILGANHPRGYYRCTRRnaqGCLATKQVQRSDQDSSLFEVTYRGRHTCS 181
                     8**************************988889**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-28111181IPR003657WRKY domain
PROSITE profilePS5081123.215115178IPR003657WRKY domain
SuperFamilySSF1182902.75E-25118182IPR003657WRKY domain
SMARTSM007744.1E-40120182IPR003657WRKY domain
PfamPF031062.5E-26121180IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0048527Biological Processlateral root development
GO:0005730Cellular Componentnucleolus
GO:0000987Molecular Functioncore promoter proximal region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MERTVNLEQK TLINELIQGK ELAKQLMNHL QPFSSPEKRN FLVGKILSSY EKALSMLKTS  60
GTDQSKPFES PHSLDNTSPR SVIFDQDYSK HRDVFKKRKV LPRWTEQVKV CMGTGPEGPL  120
EDGYSWRKYG QKDILGANHP RGYYRCTRRN AQGCLATKQV QRSDQDSSLF EVTYRGRHTC  180
SRAPQLAMAS ANSLPKHGLK AENNDQFPTH EEQDQEEEKP KQPQATGLGV KTEDFDTNNI  240
EDGRGIFQPF SFLSTPIESD NVGRDFFSDI VENGIAGPFS PPFVSPAGSE STSLSVSPWH  300
NMSSFGLANN NVQTSESDLT DILSTPNSVT NSPIGDLDLT LDKVDLELDF PFDSPEFFSS  360
CQCP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-181221781874Disease resistance protein RRS1
5w3x_D3e-181221781874Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00112ampDAPTransfer from AT2G46400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010095789.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP7654360.0KP765436.1 Morus alba WRKY transcription factor 46-like protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010095789.10.0probable WRKY transcription factor 46
TrEMBLW9RNA20.0W9RNA2_9ROSA; Putative WRKY transcription factor 46
STRINGXP_010095789.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-48WRKY family protein