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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010095553.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | bZIP | ||||||||
Protein Properties | Length: 216aa MW: 24584.1 Da PI: 10.4229 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.9 | 1.2e-09 | 117 | 152 | 5 | 39 |
CHHHCHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeie.eLeekvkeLe 39 + +r++kNRe+A rsR+RK+++ Le+kv++++ XP_010095553.1 117 VKRKRLMKNRESAARSRARKQESSLpLLEKKVEVFS 152 5789*****************986615789999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.6E-9 | 107 | 191 | No hit | No description |
SMART | SM00338 | 0.0028 | 113 | 184 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.48E-14 | 118 | 198 | No hit | No description |
SuperFamily | SSF57959 | 3.13E-5 | 118 | 158 | No hit | No description |
Pfam | PF00170 | 1.3E-6 | 118 | 152 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 120 | 135 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence Send to blast |
MEEMWNDINL SSLHHPHRSS STTTTAQTFH FQDLFSKPLL SYKDQPPPND VSSAGDTISF 60 GFGSLSQQRT SLSLNSDSEL GFKFLETSAF LVKKPALDSP ACDKKRVQQN SDDSSEVKRK 120 RLMKNRESAA RSRARKQESS LPLLEKKVEV FSLMKLVLKN KILLQAYTNE LEHKVAHLRK 180 ENARIKNQLT QFYLAAPTAL EVPKKRTLYR TLTAPF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 103 | 120 | KKRVQQNSDDSSEVKRKR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010095553.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024020825.1 | 1e-126 | bZIP transcription factor 27 | ||||
TrEMBL | W9QZJ4 | 1e-157 | W9QZJ4_9ROSA; Protein FD | ||||
STRING | XP_010095553.1 | 1e-157 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3755 | 32 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 4e-29 | bZIP family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 21399099 |