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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010094763.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | ERF | ||||||||
Protein Properties | Length: 341aa MW: 38333.9 Da PI: 5.1467 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.1 | 5.3e-14 | 118 | 165 | 3 | 54 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 ykGVr++k +g+++AeIrdp +r r +lg++ taeeAa a+ + ++++e XP_010094763.1 118 YKGVRRRK-WGKFAAEIRDP----IRgGRLWLGTYNTAEEAAGAYQKKKREFE 165 9****998.**********7....2469*****************99888876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 3.27E-15 | 116 | 164 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 7.28E-20 | 116 | 157 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.4E-20 | 117 | 164 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.5E-16 | 117 | 189 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.531 | 117 | 183 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.7E-8 | 118 | 129 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.4E-8 | 118 | 165 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.7E-8 | 140 | 156 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence Send to blast |
MPGIKNEFLN QVMNGNIKGK TKKLIKETER SNSMKRIRII CHDPYATDSS SDEDEENEIN 60 RHGFRKSKRF ISEIFIAGSP RKSCSASVYR QKPDKVNNSM SSKVDRSKKI RRSPSSMYKG 120 VRRRKWGKFA AEIRDPIRGG RLWLGTYNTA EEAAGAYQKK KREFEALQLL EKTKGGSEIL 180 SFGESRAKSE CESLNLSETS KDDTKSLFSH PSPSSVLDMS SAASNGCVEL IENLKKEECS 240 TGNARESDYE EERVLDLLEE PIVSPLANEE FELGFEENSL FGTDFVDHLF DDQDLISDDY 300 ALCGGYKNGE AGSLLPLPPI DFDFGNQGLA WLDETLNMAF P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 118 | 124 | KGVRRRK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010094763.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024020270.1 | 0.0 | ethylene-responsive transcription factor ERF073 isoform X1 | ||||
TrEMBL | W9RJN8 | 0.0 | W9RJN8_9ROSA; Ethylene-responsive transcription factor | ||||
STRING | XP_010094763.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13451 | 20 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 6e-23 | ERF family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 21402888 |