PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010093539.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 329aa    MW: 37592.1 Da    PI: 6.557
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010093539.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.36.4e-23138198158
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                     +dDg++WrKYGqK++ + ++pr+YYrCt++   gC+++k+v++ +++p ++ ++Y g+H++
  XP_010093539.1 138 MDDGHAWRKYGQKMILKGKHPRHYYRCTHKndqGCQATKQVQKIQDNPPIFRTKYYGHHRC 198
                     59***************************99999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.6E-24123199IPR003657WRKY domain
SuperFamilySSF1182903.79E-23133199IPR003657WRKY domain
PROSITE profilePS5081119.944133196IPR003657WRKY domain
SMARTSM007742.6E-33138200IPR003657WRKY domain
PfamPF031062.7E-22139198IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MACSVLPENL LSVRQKMIDE LIQGREIANQ LRTVLFESVF GDDWSVVISA EYLVSRIMES  60
FTNTLFMLNQ NDVPNEVVVS QIQRTSSRVD SPCFDGQKSE DFAKSCWTSV STTLKHTSGC  120
CKRRKTVFTW QRETSTLMDD GHAWRKYGQK MILKGKHPRH YYRCTHKNDQ GCQATKQVQK  180
IQDNPPIFRT KYYGHHRCGN LLRASELDFD STSPNQDSSL LLSFKNANLN NLTSNQAHSF  240
FSAFTKHVEL KDHMVPSCDN NMIVDGHINN QASSDYIVTS ANEFHYHHRD HDDIDDLTAF  300
DYQSPGNMAV LSPNLDFGIE GDLMPFDTL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A7e-19138198868OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010093539.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010093539.10.0probable WRKY transcription factor 46
TrEMBLW9QTT40.0W9QTT4_9ROSA; Putative WRKY transcription factor 70
STRINGXP_010093539.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.15e-29WRKY DNA-binding protein 46