PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010092057.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

bHLH

Protein Properties

Length: 547aa MW: 60554.6 Da PI: 6.9874

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010092057.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.00039	352	399	1	52
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 +r + erE++ R+++N+ f+eL l ++ + Ka+ L +A++ +k XP_010092057.1 352 KRIHKAEREKQKREQLNELFFELSNSLDLK----QPNNGKASLLCEATRLLK 399 688899*****************9988664....345556666666666555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	2.50E-4	349	406	No hit	No description
SuperFamily	SSF47459	2.22E-9	349	416	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	10.588	351	401	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.7E-5	352	423	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence Send to blast
MSRHWSRSKT ILLIWLVSAT VFYALFQMAL RNSHSSSSSS SSSSSSSGSS VSNKERRSKL 60 YDAMARDLDD HGASFLNHGE TSQSLSLFDI FALKDGSVTP VLKAANPPVR ANVLFLGTDY 120 SVPISEAVKR IFNPYFDKSI WFQNSSLYHF SMFHASHHIT PVPATELEIE AEAAAVGAVA 180 KDLCPINIVL DRVVLTSTGV LLGCWQVVSG TDPITVRARL RTALPHAPEK QLYDAAILHT 240 SFARLLGRPK ASSKEVHDSD PIKFFHELVT RLNNEIRGFR AVVSELWYVE EYDVLALALN 300 GRMKEFESGL ESIGKKMGSE DAVPLVDKVN VGLEVSVDRD CPGTKNQKKV PKRIHKAERE 360 KQKREQLNEL FFELSNSLDL KQPNNGKASL LCEATRLLKD LLAQIECLRK ENTSLLSESH 420 YVTVEKNELR EENSTLGTQI GKLQSEIEAR VVQSKPDLNA PPPDCLTMPA PEPTLGQVHT 480 VLVLPFHSDL QAYPLSDAAQ VTSNPTSNVS KPHARYPTSG DSWPAQLLRQ QPEAEEDSAK 540 VCNSSNR

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence Send to blast

MSRHWSRSKT ILLIWLVSAT VFYALFQMAL RNSHSSSSSS SSSSSSSGSS VSNKERRSKL  60
YDAMARDLDD HGASFLNHGE TSQSLSLFDI FALKDGSVTP VLKAANPPVR ANVLFLGTDY  120
SVPISEAVKR IFNPYFDKSI WFQNSSLYHF SMFHASHHIT PVPATELEIE AEAAAVGAVA  180
KDLCPINIVL DRVVLTSTGV LLGCWQVVSG TDPITVRARL RTALPHAPEK QLYDAAILHT  240
SFARLLGRPK ASSKEVHDSD PIKFFHELVT RLNNEIRGFR AVVSELWYVE EYDVLALALN  300
GRMKEFESGL ESIGKKMGSE DAVPLVDKVN VGLEVSVDRD CPGTKNQKKV PKRIHKAERE  360
KQKREQLNEL FFELSNSLDL KQPNNGKASL LCEATRLLKD LLAQIECLRK ENTSLLSESH  420
YVTVEKNELR EENSTLGTQI GKLQSEIEAR VVQSKPDLNA PPPDCLTMPA PEPTLGQVHT  480
VLVLPFHSDL QAYPLSDAAQ VTSNPTSNVS KPHARYPTSG DSWPAQLLRQ QPEAEEDSAK  540
VCNSSNR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010092057.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024018562.1	0.0	uncharacterized protein LOC21388781
TrEMBL	W9QXK2	0.0	W9QXK2_9ROSA; Uncharacterized protein
STRING	XP_010092057.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9738	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.3	2e-54	bHLH family protein

Link Out ? help Back to Top
Entrez Gene	21388781