PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010091980.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 417aa    MW: 46260.8 Da    PI: 6.9547
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010091980.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87e-12348392654
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +++Er RR ri +++ +L+el+P+      k  + a++L +AveYIk+L
  XP_010091980.1 348 SIAERVRRTRISERMRKLQELVPNM----EKQTNTADMLDLAVEYIKDL 392
                     689*********************7....467***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.066342392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.85E-16345405IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.59E-12346397No hitNo description
Gene3DG3DSA:4.10.280.101.1E-14347406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-12348398IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.3E-9348392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0042335Biological Processcuticle development
GO:0048573Biological Processphotoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MESSDLQHHH HHHHQQMNSG LMRYRSAPSS YFTDMLDREF CQQFFNRPSS PETERIFARF  60
MNSDGGGSSN NNNTAEVEDL QKVNDNAEAE AAVLRNQQQQ QQQQQQQQSN NIISGNYSSS  120
SSFYQSSSKP PLPNQGISSG NTNEGSYSMG MNQFPPMRTG GISNSNLIRH SSSPAGLFAN  180
INIDTSGFGA MRGMGTYGAS DSTDEEASFS TPSRLNKFSS GPASSTGLMS PIAEIDDKTM  240
VGNSQDTGAF GDSRSNSFVS SFPMGSWDDS PIMSENITGL KRLRDDHDVK QYSSETQNVE  300
SGTRPLAHHL SLPKTSSEMA AIEKFLQFQD SVPCKIRAKR GCATHPRSIA ERVRRTRISE  360
RMRKLQELVP NMEKQTNTAD MLDLAVEYIK DLKKQVQTLS DSRAKCTCSS KQQQQQQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00646PBMTransfer from LOC_Os08g39630Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010091980.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010091980.10.0transcription factor bHLH130
TrEMBLW9QPP40.0W9QPP4_9ROSA; Uncharacterized protein
STRINGXP_010091980.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41853455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.15e-72bHLH family protein