PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010091656.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 570aa    MW: 61049.1 Da    PI: 5.2772
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010091656.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.27.1e-09386434355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  XP_010091656.1 386 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 434
                     58*************************9....556*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.38E-11381438No hitNo description
SuperFamilySSF474598.9E-17381451IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.485383433IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-16384450IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.2E-6386434IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.7E-10389439IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    Send to blast
MDNMGEKDKF EVDNKNEDPM SYSPGMSSDW RFDGSSSLTN TSMGLVQAGN SMAIDKCDLI  60
ATSSCSSASM VDSFVPTLWD HHPTSSQNLG FCEMGVQNNV SALNPLGIRK GVPASLRSGI  120
DRTLDMCWNP SSSLLKGGIF LPNMPGMLPQ GLSQLPADSA FIERAARFSC FNGGNFGDMV  180
NPFAIPEPMG VYSRGGGMIH GAQEVLAGNG VRPVSGMNSQ RNELNNASEV SRDASVTVEP  240
GAIEVSPLKN ERKSESQGKS HDEVKQGVGG SGNESDEAEY SSGVGVGQEE LSMLEGNGGE  300
AATKGLGAKK RKRNGPDSDL EQAKGASQQH GESAKDNTEL QQKGDQNPST TTNKTSGKHG  360
KQGSPASDPT KEEYIHVRAR RGQATNSHSL AERVRREKIS ERMKFLQDLV PGCSKVTGKA  420
VMLDEIINYV QSLQRQVEFL SMKLATVNPR LDINIEGLLA KDMLQSRIGS SSSLAFSPDM  480
PMAYPALQPT QQGQLILTGL PGVGSSSDLL RRTISSHLTP LTGGFKEPTQ LPNVWEDELN  540
NVVQMSFGTR TSNNQDVDGS LPASNMKVEL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010091656.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1468112e-79EF146811.1 Populus trichocarpa clone WS01214_F06 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010091656.10.0transcription factor bHLH49
TrEMBLW9RAQ90.0W9RAQ9_9ROSA; Uncharacterized protein
STRINGXP_010091656.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF72493248
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-129bHLH family protein