PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010091436.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 505aa    MW: 55496.8 Da    PI: 7.3345
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010091436.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.50.000143794003455
                     TTS-STCHHHHHHHHHHHHHHH CS
             HLH  34 pskKlsKaeiLekAveYIksLq 55 
                     p+ K+ Ka+iL +A+ Y++ Lq
  XP_010091436.1 379 PCNKVKKASILDEAIAYMRTLQ 400
                     7889*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.9E-5358408IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.37E-6377416IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000830.00158379404No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MDGLVPVELV WKKDEIAIRR PTTTIPNSTQ MNNTPNYLLA ATSTNPTTNP PHKNYLHFGL  60
FPDHRHHHER FVVSAHRNTF KDDKYVNKFK KLSQLKTPLG PVPGDSHIVP DNDYDQQHPD  120
HFHKYSQVLG HYLSTTDDHD HVEKIMPRTT KLQQAVGPPV VRSSYHDHDH VNSRQVPYYS  180
RCRSSNHVNI DDDGDRIGEY NNNCKIKRGT SSSSSSSKAT SRRGSSTRRR ASASGLLNFV  240
TTTEFSTSPN HQLLDGRPAV VATTSANYTT SMNSLPLPKP ITIGTNYYTS AGVKSPPPPP  300
PDDDHDNQTV LLLVPTNDDG DDDQHSQAAD PLASINSKQK HSAAESPNDK CDEALVPSFS  360
VCSNDPINTN HQDDSEPCPC NKVKKASILD EAIAYMRTLQ LQLQMMSMGT ATGVMPPNPI  420
MLAAGNGAPP HPHLRTTFAM PPSTFQMLAF PPTAAAAATF VPINMATSLP LVPPSIPLSL  480
STSNNSNPTH LNPDHRNPFN PNFFG
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010091436.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024018172.10.0transcription factor APG isoform X1
TrEMBLW9QVX30.0W9QVX3_9ROSA; Uncharacterized protein
STRINGXP_010091436.10.0(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46970.16e-10phytochrome interacting factor 3-like 1