PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010091233.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 342aa    MW: 38147.1 Da    PI: 5.1295
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010091233.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.19.8e-112683081055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_010091233.1 268 RKRRERINERLKILQNLVPSG-----TKVDISTMLEEAVHYVKFLQ 308
                     9*******************8.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.799258307IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.03E-13258323IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-12263317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-11264313IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.35E-12267312No hitNo description
PfamPF000104.2E-8268308IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009733Biological Processresponse to auxin
GO:0016049Biological Processcell growth
GO:0048766Biological Processroot hair initiation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MESIGAFPEG DWESFSRMFS EDLDFTPHFL GQCSFPNSHF GQSSSSFCPN ISRDHDQANT  60
ESLFHTLDSL NSNLQYLSQE SSYTSTSATQ ESYYFSDSCH IPVTNDVSLP IFLTDHEKNN  120
VDGSYNIPAL SDINVIMGEA FCNVKEDYGN HRKRMSDAAE LDKINPESPP NPKKKARVSS  180
DAQKNKKNVE WPKKRQLKVQ APNGKEEENN TGIDGQSTSS YSSEDDNASQ ENNGGAISDT  240
KSLTAVNLSG KARASRGSAT DPQSLYARKR RERINERLKI LQNLVPSGTK VDISTMLEEA  300
VHYVKFLQLQ IKLLSSDDLW MYAPIAYNGM DIGLNKKLSE LV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010091233.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010091233.10.0transcription factor bHLH85
TrEMBLW9QMS70.0W9QMS7_9ROSA; Transcription factor bHLH85
STRINGXP_010091233.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.19e-59ROOT HAIR DEFECTIVE 6-LIKE 2