PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010090864.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 299aa    MW: 33199.9 Da    PI: 6.8396
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010090864.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.62.2e-08157197954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_010090864.1 157 ARLRRERISERIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 197
                     699*****************87.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.078148197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-13153208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-11153210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.4E-12154203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-5158197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.77E-5171202No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010197Biological Processpolar nucleus fusion
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MENINHSAYN YNKLTNNSSS SWDLQIPNNT NIIMDQDHMN LQYLHHHIPS THNNIPLFFP  60
NYHSHSSPSS SSPPCLDQLP SSNSNIFNHH HHHQDQELTT ELDDGDDHDD DEEDLGAMKE  120
MMYKIAAMQP VEIDPATIRK PRRRNVRISD DPQSVAARLR RERISERIRI LQRLVPGGTK  180
MDTASMLDEA IRYVKFLKRQ IRLLGQPNNN NNLITTNNHL SPPQLGVNII NSNTANIVNS  240
LCLASSAENN IIMNWGLDKL VPTKLGHTGS IGSNPTTAGS ASGRFAFAAG GSSGSFGGA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157162RLRRER
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010090864.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010090864.10.0transcription factor HEC3
TrEMBLW9QLV90.0W9QLV9_9ROSA; Uncharacterized protein
STRINGXP_010090864.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65134141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09750.11e-38bHLH family protein