PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010089558.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 415aa    MW: 46023.3 Da    PI: 4.3919
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010089558.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.8e-194695255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  XP_010089558.1 46 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 95
                    789******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.93E-3145102No hitNo description
SuperFamilySSF541714.05E-1946103IPR016177DNA-binding domain
SMARTSM003801.6E-3546109IPR001471AP2/ERF domain
PfamPF008471.0E-134695IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-2746102IPR001471AP2/ERF domain
PROSITE profilePS5103219.55946103IPR001471AP2/ERF domain
PRINTSPR003676.1E-84758IPR001471AP2/ERF domain
PRINTSPR003676.1E-86985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MARKRKAASE GVEDKSSSEG NMAWDDMVKE AAAAAALGGA RRARKRFVGV RQRPSGRWVA  60
EIKDTIQKIR VWLGTFDTAE EAARAYDEAA CLLRGANTRT NFWPCSSSSS SSPALPSKIT  120
NLLLQRLKAR NNSLNTSSAV SPPSSFPVEH QQYQHDAEEE PMDFSDTQFT DFLNDPEDYT  180
ISNNDMIGNN NISAATIDDM TSSFESCLTQ REGCRGREAD LEYNFSDGSG PSSSVEYGNS  240
HGEEDDGEEQ GTDLRDLDFQ FVDDVKSSCY YSPFEIAEEI EEPIMEPEAY SDEPSMLRAA  300
MKRMKYERKF SASLYAFNGI PECLKLKIGA ANVNGRSGRS DQLIRNLQNA CNNNNNNNNT  360
ENNKDEMAKK EDVKVREEDD RKTSNDAGSS SSTFGTDGEL SLWSSLDLPP ICFVN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-12461021471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010089558.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010089558.10.0putative uncharacterized protein DDB_G0281733
TrEMBLW9QQT60.0W9QQT6_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010089558.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-21related to AP2 11