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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_010089411.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
|
| Family |
Trihelix |
| Protein Properties |
Length: 140aa MW: 15757.2 Da PI: 6.2528 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010089411.1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 40.3 | 8.4e-13 | 1 | 63 | 17 | 78 |
trihelix 17 meerlrrgk.lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessst 78
m++r+++g +++ lWe++++km+ g+ r+ +C+ekwe++n++y k + +++++++
XP_010089411.1 1 MDSRFSQGGfSEEVLWEDIAAKMACLGYDRNGFMCREKWESINNEYLKKSSKLEMSSKKRKEN 63
56777775437899********************************99887777665555544 PP
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| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| CDD | cd12203 | 4.50E-17 | 1 | 49 | No hit | No description |
| Pfam | PF13837 | 1.3E-8 | 2 | 53 | No hit | No description |
| Sequence ? help Back to Top |
| Protein Sequence Length: 140 aa
Download sequence Send
to blast |
MDSRFSQGGF SEEVLWEDIA AKMACLGYDR NGFMCREKWE SINNEYLKKS SKLEMSSKKR 60
KENSRGYNNN ESSTSLYNHG GYNCDQMNDG TANSSPSPSN ANVRSTTHDH SCFPAFLIGE 120
GSENLWENYG LKINKGGQNQ
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that prevents growth. Regulates perianth architecture in flower, mostly in the second whorl, probably by suppressing growth between initiating sepals, ensuring that they remain separate, and by modulating organ shapes. Required for the establishment of auxin flux. {ECO:0000269|PubMed:10572040, ECO:0000269|PubMed:15269176, ECO:0000269|PubMed:18080804}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Expression within the newly arising sepals is repressed via the PINOID auxin-response pathway. {ECO:0000269|PubMed:15269176}. |
