PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010088258.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family CPP
Protein Properties Length: 713aa    MW: 78464.3 Da    PI: 8.3875
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010088258.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR40.55.3e-13361400241
             TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                     ++k C Ckks Clk YC+Cfaa+++Cs++C+C++C+Nk +
  XP_010088258.1 361 KRKYCCCKKSGCLKIYCQCFAAEVYCSDSCTCQNCQNKID 400
                     6899*********************************976 PP
2TCR46.19.8e-15435474140
             TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                     k++kgCnC+kskC kkYCeCf+a++ Cs +C CedC+N+ 
  XP_010088258.1 435 KHRKGCNCSKSKCAKKYCECFQAKVGCSLNCWCEDCQNSF 474
                     589***********************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011142.4E-12360401IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163432.413361475IPR005172CRC domain
PfamPF036381.2E-9363398IPR005172CRC domain
SMARTSM011141.2E-15435476IPR033467Tesmin/TSO1-like CXC domain
PfamPF036381.2E-10438473IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 713 aa     Download sequence    Send to blast
MDSPPEPNRL TPSPPPTPPR PPSSQQSPCF FYYASNLSPL PQHYVPRHFA SPNDQFVFSS  60
SSQRRSVDQG NYNDDRQIQE NISASPLSYI RHSDSYRMNP GFSSIRPGLM SDRHNLPNPS  120
ILRQRGNVNS EDVSPLESRN FNAHHVSRPS QLGSRIINAD HVSRPYHQTF QHHRRRHLSF  180
GTTSFHEGRM SNIRQLLSVL SRYNTNAGAS ANIKTLNKTS LIRNHVISRG ATLSSSPNVF  240
ASGTLGMCRN SQEGQLVNER NNDLARVSDT NSACAVSGET SSLPNNHPSE RRAIIKESFA  300
PSTSIGGVVP LSGPMQVIHD EQQIVPCTAS ISALVHTNEV EELNQENPRR KRLKASNGDE  360
KRKYCCCKKS GCLKIYCQCF AAEVYCSDSC TCQNCQNKID NEETVLRIRS EIKSRNPHAF  420
APKEDGTLTT PSLAKHRKGC NCSKSKCAKK YCECFQAKVG CSLNCWCEDC QNSFGRKTEI  480
AFYRAEILDE PSNGNTGSMS RIDCSNSGTG NTNQFPDQEG CHGLRNYTPS LPPSSIPSTT  540
PSLAWHRKGC NCKITFYRAE ILDKSSNGNT CSMSRIDCSN SGTGNTNQFP DQEGCHGLRN  600
YTPSLPPSSI PSTEVKAVET SQPRNAVQAS SPNQSQVQLP ARLVQDMMVG NEIKAEETSQ  660
PSNAEQACSA NQKHVLLPPA DGPVSVANLQ PGSRPDRELV PWNVSSPPSH LPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A3e-1236247211120Protein lin-54 homolog
5fd3_B3e-1236247211120Protein lin-54 homolog
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010088258.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024026163.10.0uncharacterized protein LOC21388613
TrEMBLW9QQ430.0W9QQ43_9ROSA; Uncharacterized protein
STRINGXP_010088258.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF85652841
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.13e-44TESMIN/TSO1-like CXC 2