PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010087781.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 243aa    MW: 28377.6 Da    PI: 9.3726
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010087781.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.54.7e-0891136555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     h ++Er RR++ ++++  L ++lP       +K++K +i++ A   I++Lq
  XP_010087781.1  91 HMMNERMRRQKQKDGYLALYSMLPIG-----TKNDKNSIVKIAASTIQQLQ 136
                     789*********************97.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.53E-1185151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.46786135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.38E-590136No hitNo description
PfamPF000102.3E-591136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-691152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-492141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MDVFFPQEQS GNIFWYSESL PEEKISAFLP YTNMPRNEFG QENACNYYNG PYNMKKRMIE  60
FLRRSSSSIT VGKISGQKEV EGYEKETSFR HMMNERMRRQ KQKDGYLALY SMLPIGTKND  120
KNSIVKIAAS TIQQLQSYKE RLRRREMELE AILAENDEKE MKKRSAMKIK VKVANPISGV  180
DSMVELINCL KRLGLKARNI RSVFTKEELS VELEIETKVG AAEIEEALQL TLYEAEWRLR  240
SHF
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010087781.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010087781.11e-180transcription factor bHLH92
TrEMBLW9QNW01e-179W9QNW0_9ROSA; Uncharacterized protein
STRINGXP_010087781.11e-179(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF125722734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.13e-37bHLH family protein