PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010087599.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family CAMTA
Protein Properties Length: 1046aa    MW: 118009 Da    PI: 6.284
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010087599.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1177.51.7e-55201362118
            CG-1   2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 
                     ++ ++rwl++ ei++iL n++k++++ e+++ p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+ee+++fqr
  XP_010087599.1  20 VEAQHRWLRPAEICEILRNYKKFRIAPEPAHMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEEKESFQR 114
                     6779******************************************************************************************* PP

            CG-1  97 rcywlLeeelekivlvhylevk 118
                     r+yw+Leeel++ivlvhy+evk
  XP_010087599.1 115 RSYWMLEEELSHIVLVHYREVK 136
                     *******************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143780.67815141IPR005559CG-1 DNA-binding domain
SMARTSM010767.3E-7618136IPR005559CG-1 DNA-binding domain
PfamPF038591.2E-4821134IPR005559CG-1 DNA-binding domain
SuperFamilySSF812962.8E-5496551IPR014756Immunoglobulin E-set
PROSITE profilePS5029715.698631760IPR020683Ankyrin repeat-containing domain
CDDcd002048.61E-11647758No hitNo description
Gene3DG3DSA:1.25.40.204.7E-16647785IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.2E-15655760IPR020683Ankyrin repeat-containing domain
PfamPF127963.3E-6671761IPR020683Ankyrin repeat-containing domain
SMARTSM002480.041699728IPR002110Ankyrin repeat
PROSITE profilePS500889.084699731IPR002110Ankyrin repeat
SMARTSM00248340738767IPR002110Ankyrin repeat
SuperFamilySSF525402.39E-7868923IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000158.8872894IPR000048IQ motif, EF-hand binding site
PfamPF006120.025874893IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.565874902IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0039895917IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.45896920IPR000048IQ motif, EF-hand binding site
PfamPF006122.1E-4898917IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010150Biological Processleaf senescence
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 1046 aa     Download sequence    Send to blast
MAESRRFGLA NQLDIEQILV EAQHRWLRPA EICEILRNYK KFRIAPEPAH MPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEEKE SFQRRSYWML  120
EEELSHIVLV HYREVKGNRT NFNRIKETEE ADIAPSSDSS ASSSFPTNSY RMPSQTTDTT  180
SLNSAQASEY EDAESACNQA SSRLNSFLEL QQPFAEKINA GVTDAYYPIS FSMHLDINFH  240
MKRGLPTLMQ LLITDNYQEK LSSVPGMGFS SLALADKSEG NRSAGVTHDH QKNLNFPAWD  300
GTLENDNAGI QLPFQPSFSA AQSANLGVIQ KQEQEPLEQL FPNGFSKRPD FGSHPQVQEE  360
WQNLHTGAAY NLTSRYHEEV NGVELLQIQQ GNNEHEECLK SVSKSNSPLE EKSYISGIKQ  420
SLVDGPFAEE GLKKLDSFNR WMSKELGDVN ESHMQTSSRA DWDTVESENC VDDSSQARLD  480
NYVLSPSLSQ DQLFSIIDFS PNWAYETSEV KVIADGVLRC HAPRHKVGRV PFYVTCSNRL  540
ACSEVREFEY RQNEVQDVDT KYNPNSCTDE ILELRFGNLL SLKSTSPNSD PVSVAEQSQL  600
NSKISSLLKE DKNEWDQMLK LTSEGDFSME RVQEQLHQKL LKEKLREWLL QKVAEGGKGP  660
SVLDEGGQGV LHFAAALGYD WALEPTTIAS VSVNFRDVNG WTALHWAAFC GRERTVASLI  720
SLGAAPGLLT DPSPKHPTGK TPADLASDNG HKGIAGYLAE SALSSHLVCL NLDTKEGKAA  780
ETLAAKAVQT VSERTATRIN DGDSERLSLK DSLAAVCNAT QAAARIHQVF RVQSFQRKQL  840
KEYGDDRFGM SDEQALSLIA VKTNKSVHHD DDVHAAAVRI QNKYRSYKGR KEFLIIRQRI  900
VKIQAHVRGH QVRKNYRNII WSVGIVEKII LRWRRKGTGL RGFKSEALTE GSSMQNSSYK  960
DDDDDFLKKG RKQTEERMQK ALTRVKSMVQ YPEARNQYRR LLNVVTEIQE SKVLCDVMNT  1020
EEAADFDIDI EALLDDDTYM PAAAPE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3'. Binds calmodulin in a calcium-dependent manner in vitro (PubMed:12218065). Regulates transcriptional activity in response to calcium signals (Probable). Involved in freezing tolerance in association with CAMTA1 and CAMTA2 (PubMed:23581962). Required for the cold-induced expression of DREB1B/CBF1, DREB1C/CBF2, ZAT12 and GOLS3 (PubMed:19270186). Involved in response to cold. Contributes together with CAMTA5 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). Involved together with CAMTA2 and CAMTA4 in the positive regulation of a general stress response (GSR) (PubMed:25039701). Involved in the regulation of GSR amplitude downstream of MEKK1 (PubMed:25157030). Involved in the regulation of a set of genes involved in defense responses against pathogens (PubMed:18298954). Involved in the regulation of both basal resistance and systemic acquired resistance (SAR) (PubMed:21900483). Acts as negative regulator of plant immunity (PubMed:19122675, PubMed:21900483, PubMed:22345509, PubMed:28407487). Binds to the promoter of the defense-related gene EDS1 and represses its expression (PubMed:19122675). Binds to the promoter of the defense-related gene NDR1 and represses its expression (PubMed:22345509). Involved in defense against insects (PubMed:23072934, PubMed:22371088). Required for tolerance to the generalist herbivore Trichoplusia ni, and contributes to the positive regulation of genes associated with glucosinolate metabolism (PubMed:23072934). Required for tolerance to Bradysia impatiens larvae. Mediates herbivore-induced wound response (PubMed:22371088). Required for wound-induced jasmonate accumulation (PubMed:23072934, PubMed:22371088). Involved in the regulation of ethylene-induced senescence by binding to the promoter of the senescence-inducer gene EIN3 and repressing its expression (PubMed:22345509). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:18298954, ECO:0000269|PubMed:19122675, ECO:0000269|PubMed:19270186, ECO:0000269|PubMed:21900483, ECO:0000269|PubMed:22345509, ECO:0000269|PubMed:22371088, ECO:0000269|PubMed:23072934, ECO:0000269|PubMed:23581962, ECO:0000269|PubMed:25039701, ECO:0000269|PubMed:25157030, ECO:0000269|PubMed:28351986, ECO:0000269|PubMed:28407487, ECO:0000305|PubMed:11925432}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00042PBMTransfer from AT2G22300Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010087599.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene and methyl jasmonate (PubMed:11162426, PubMed:12218065). Induced by infection with the fungal pathogen Golovinomyces cichoracearum (powdery mildew) and the bacterial pathogen Pseudomonas syringae pv tomato strain DC3000 (PubMed:22345509). {ECO:0000269|PubMed:11162426, ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:22345509}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024021686.10.0calmodulin-binding transcription activator 3
SwissprotQ8GSA70.0CMTA3_ARATH; Calmodulin-binding transcription activator 3
TrEMBLW9QNC60.0W9QNC6_9ROSA; Calmodulin-binding transcription activator 3
STRINGXP_010087599.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF82842735
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0signal responsive 1
Publications ? help Back to Top
  1. Zhang L,Du L,Shen C,Yang Y,Poovaiah BW
    Regulation of plant immunity through ubiquitin-mediated modulation of Ca(2+) -calmodulin-AtSR1/CAMTA3 signaling.
    Plant J., 2014. 78(2): p. 269-81
    [PMID:24528504]
  2. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  3. Rahman H,Yang J,Xu YP,Munyampundu JP,Cai XZ
    Phylogeny of Plant CAMTAs and Role of AtCAMTAs in Nonhost Resistance to Xanthomonas oryzae pv. oryzae.
    Front Plant Sci, 2016. 7: p. 177
    [PMID:26973658]
  4. Benn G, et al.
    Plastidial metabolite MEcPP induces a transcriptionally centered stress-response hub via the transcription factor CAMTA3.
    Proc. Natl. Acad. Sci. U.S.A., 2016. 113(31): p. 8855-60
    [PMID:27432993]
  5. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]
  6. Lolle S, et al.
    Matching NLR Immune Receptors to Autoimmunity in camta3 Mutants Using Antimorphic NLR Alleles.
    Cell Host Microbe, 2017. 21(4): p. 518-529.e4
    [PMID:28407487]
  7. Kim YS, et al.
    CAMTA-Mediated Regulation of Salicylic Acid Immunity Pathway Genes in Arabidopsis Exposed to Low Temperature and Pathogen Infection.
    Plant Cell, 2017. 29(10): p. 2465-2477
    [PMID:28982964]
  8. Jacob F, et al.
    A dominant-interfering camta3 mutation compromises primary transcriptional outputs mediated by both cell surface and intracellular immune receptors in Arabidopsis thaliana.
    New Phytol., 2018. 217(4): p. 1667-1680
    [PMID:29226970]