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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010087331.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | bZIP | ||||||||
Protein Properties | Length: 217aa MW: 24382.5 Da PI: 9.7598 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43.4 | 7.3e-14 | 103 | 161 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r +r+++NRe+ArrsR R+k++ieeL+ v +L++ N++L ++l +l + ++ +e+ XP_010087331.1 103 RRLKRMISNRESARRSRMRRKMQIEELQYLVGQLQTTNRQLSEKLIQLLDCNQQILQEN 161 789*********************************************99999999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.1E-11 | 99 | 163 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.5E-11 | 101 | 156 | No hit | No description |
PROSITE profile | PS50217 | 10.277 | 101 | 164 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.9E-13 | 103 | 161 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.06E-10 | 103 | 157 | No hit | No description |
CDD | cd14702 | 1.74E-13 | 104 | 151 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 106 | 121 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MEKNNELKAS LTQKQPQYYP GTINKHALEL VNLGHYSLSQ QNPNSQSSNI SDPILPFAIS 60 TAARLFPNNL SMSPGNDDST TDDSREIGRG REVGVGVVVN NERRLKRMIS NRESARRSRM 120 RRKMQIEELQ YLVGQLQTTN RQLSEKLIQL LDCNQQILQE NSQLKEKVSS LQIILSDLLV 180 PLRNNAGEDH NSSADRMLKA QGSSTPSVTI SSMQLLH |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010087331.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010087331.2 | 1e-100 | basic leucine zipper 43 | ||||
TrEMBL | W9QY74 | 1e-155 | W9QY74_9ROSA; G-box-binding factor 1 | ||||
STRING | XP_010087331.1 | 1e-156 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13044 | 24 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60830.1 | 5e-20 | basic leucine-zipper 70 |
Link Out ? help Back to Top | |
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Entrez Gene | 21395865 |