PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010087124.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | bZIP | ||||||||
Protein Properties | Length: 441aa MW: 47431.8 Da PI: 6.1996 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50 | 6.2e-16 | 222 | 277 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++kr+rr+ +NRe+ArrsR+RK+a++ eLe+ v +L e ++L k+l+ ++ ++++ XP_010087124.1 222 DVKRARRMLSNRESARRSRRRKQAQMSELETQVGQLRVEHSTLLKRLSDMNHKYDN 277 68******************************************999988887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.1E-11 | 219 | 274 | No hit | No description |
SMART | SM00338 | 6.9E-19 | 220 | 284 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.024 | 222 | 276 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.1E-13 | 223 | 276 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.83E-11 | 223 | 275 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 227 | 242 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 4.1E-25 | 291 | 416 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0002240 | Biological Process | response to molecule of oomycetes origin | ||||
GO:0009626 | Biological Process | plant-type hypersensitive response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000693 | Biological Process | positive regulation of seed maturation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 441 aa Download sequence Send to blast |
MNSVFSVDEI SDGLWSSSPA MNRSASEWAL ERFLEEFSSP VTTPRPPIAD SLAVPSVASP 60 SVASQSSTSK RHDGDDEVVE IKKPDNRHAS SSDPSSTAVI DSDQYREFLK NQLDLACAAV 120 ALTREALSAK PGDSANASRS QLQVSIPSQS GSVALDKGML NGRSMPQNES DDGPLGIPAL 180 PPIQKKMETQ SKQTTSGSSK EDSDDDELDG DMEITENMDP SDVKRARRML SNRESARRSR 240 RRKQAQMSEL ETQVGQLRVE HSTLLKRLSD MNHKYDNAAV DNRILKADIE TLRAKVKMAE 300 ETVKRVTGIN PLLLAVSNLT AAGVPSVNVP MDASTNAAVS MQQSPNQLFH QAVPGITTAV 360 PHHQRLDGSF HGSTSIPLAG NLKNDVAPQS DVGGNKLPSI HPTARLANMQ KQLAPGASPG 420 EAVPGWGPEV AKNNKQNHNN M |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 236 | 243 | RRSRRRKQ |
2 | 238 | 243 | SRRRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010087124.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010087124.1 | 0.0 | light-inducible protein CPRF2 | ||||
TrEMBL | W9QCP7 | 0.0 | W9QCP7_9ROSA; Light-inducible protein CPRF2 | ||||
STRING | XP_010087124.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13691 | 18 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54620.1 | 9e-57 | basic leucine zipper 25 |
Link Out ? help Back to Top | |
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Entrez Gene | 21395761 |