PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010086567.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB_related
Protein Properties Length: 681aa    MW: 74975.1 Da    PI: 9.9476
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010086567.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.93.5e-111768348
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrwqkyl 48
                      W t+E++ll++av+++G ++W+++++++         +t+ +ck ++++++
   XP_010086567.1 17 TWGTWEELLLACAVHRYGADSWDSVSSELRkrtstlHLLTPHSCKQKYHDLR 68
                     7**********************************9889*********9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007173.2E-51470IPR001005SANT/Myb domain
SuperFamilySSF466892.56E-51670IPR009057Homeodomain-like
PfamPF002498.5E-111667IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.7E-41867IPR009057Homeodomain-like
CDDcd001679.22E-52167No hitNo description
Gene3DG3DSA:1.20.920.102.2E-13288428IPR001487Bromodomain
SMARTSM002974.7E-11300409IPR001487Bromodomain
SuperFamilySSF473702.75E-16306417IPR001487Bromodomain
CDDcd043694.42E-13307404No hitNo description
PfamPF004391.4E-6318393IPR001487Bromodomain
PROSITE profilePS5001411.05319390IPR001487Bromodomain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 681 aa     Download sequence    Send to blast
MAKPNFPEKQ TISTTTTWGT WEELLLACAV HRYGADSWDS VSSELRKRTS TLHLLTPHSC  60
KQKYHDLRRR FTQNAVVSSA AADGAATANA AVASIPFLDE LRRLRVAELR REVERYDLSI  120
VSLESKVEKL KEEREQSLKE TDERAEKADL EKEDGETKPE NWSPENIAEK AVSGEGSVHD  180
ERSVDESNST NLKDDAPETG GAAAEKEPER ARECGKPAVE DSYDGSSETI AKGSAAVSPV  240
EESEKVNSEK DGGGESAESK GGEEGAKEVC SSEMQSSTSL SRKKVEEPDE PDAEDQSVAT  300
KRAHHVESKS LADFLEILRS HRSGSFFERR LEIQDTTNYI NMIRQHIDFE MVRIRLEEGW  360
YSGCKSKFFR DVLLILNNAI VFFGRRSPES KAALELRLLV LKEMAQRSAK QDSLPKEETQ  420
APKPEPEETD MLLRKPKLSV PMNACRKRSS ITARAASTSS SGPERKKEQT QTSALLDVKP  480
AMSWKQSDKS SDKAEELPST KKRRKERLRA GAKNNSSNKS SVSRSNAENN KNSGANSNAS  540
PSTKGGTSNE ISISKSDKKN NNSNASGKKQ SAANFLNRMK RGSLSSNRSL PETLKDSDKS  600
SRGGAEQKKS GGNKGNSKQK EQTSTRKASG GKQAKEHESP SKRSVGRPSK RAAAAAVPAK  660
RSRQSIETEV TAARNAKKRR K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1676680KKRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010086567.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010086567.10.0uncharacterized protein LOC21391024
TrEMBLW9QW180.0W9QW18_9ROSA; Uncharacterized protein
STRINGXP_010086567.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18702972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57980.13e-67DNA-binding bromodomain-containing protein