PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010086565.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 645aa    MW: 69981.5 Da    PI: 6.8982
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010086565.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.47.9e-30267326159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r a+d +++++tYeg+Hnh+
  XP_010086565.1 267 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRYADDISILITTYEGTHNHP 326
                     58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-30252328IPR003657WRKY domain
SuperFamilySSF1182904.71E-27260328IPR003657WRKY domain
PROSITE profilePS5081128.506262328IPR003657WRKY domain
SMARTSM007748.7E-35267327IPR003657WRKY domain
PfamPF031061.9E-26268326IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 645 aa     Download sequence    Send to blast
MEGISGSRSG HGGLVVKGEI KWVESNGDEE EDCNEGNFAH KIRKSRNEYD ENEDIKRSSS  60
SQKYLGGSKE ENDQLESTRA EIGEVREENQ RLKMYLGRIM KDYETLQMQF NNIVQQEAAK  120
KSIENSENNH DEAVEETKLV SLTLGSFSSN PKINKEVKNK IPSNNVIDVE KDQNEKQVLK  180
EGLSLGLSNY KDINEASRSG ATDQGGPAVS NPSAVSSFEE PKEEAGETWP PSKVLKEKRS  240
AEDEVSQQNQ VKKARVCVRA RCDTPTMNDG CQWRKYGQKI AKGNPCPRAY YRCTVAPSCP  300
VRKQVQRYAD DISILITTYE GTHNHPLPLS ATAMASTTSA AASMLLSGSS TSSGTRPPST  360
ELHGFSTFDS SKWNFNKFIS SPYSPYSSFS SSHPTITLDL TTTPSSSSLN KFSSSSSISP  420
INYPHHTTWY PSTSLSFGSS DSNTNTSWNH NNNNGFLSYG SSTTQAYNLK SQIGALASLG  480
RQTTSLHANN NNNNNVNYYS HNSMQKGNPS TNQVQSMVLP DTIAAATKAI TADPTFQSAL  540
VAAFTSVIGG GQGSNNVVQG GGDHNSNIYN NVVQKLKWGG EHTHHHDHNS TGIGGCSSTF  600
LNKEGLVGNS QPAGNLMFSS PNSLSFSASK SASASPGDTT REQTS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A8e-212673281777Probable WRKY transcription factor 4
2lex_A8e-212673281777Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010086565.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010086565.10.0probable WRKY transcription factor 72
TrEMBLW9QB970.0W9QB97_9ROSA; Putative WRKY transcription factor 72
STRINGXP_010086565.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-70WRKY DNA-binding protein 72