PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009804982.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 253aa    MW: 28710.2 Da    PI: 6.2536
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009804982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.9e-1281133155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++++h e+Er+RR+++ + ++ Lr+ lP      ++K s +e   +A +YI +Lq
  XP_009804982.1  81 KKVMHREIERQRRQEMATLYASLRQQLPLE--IIKGKRSTSEHILEAANYIEYLQ 133
                     6899*************************7..4*********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.29E-1477148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.78E-1078137No hitNo description
PROSITE profilePS5088813.03380132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-981133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-982150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.004286138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MMDNFHSIFP LQQDVDDNDS HELLYNNPCN FLYQQDLVTD FAPLESDKNT LSFNNNQKEN  60
KVGKASAASL PVEKTSDDKQ KKVMHREIER QRRQEMATLY ASLRQQLPLE IIKGKRSTSE  120
HILEAANYIE YLQKNVRNLE DKREKLNKTS NSSNLDYTKS GRSSTSDSSS STNVTVKQCL  180
DGMEILVNCG VESEGFRLSR VLEVLLQEGL NIVNCSCTKT STSLLHTIRT EVASQARIDV  240
HVIQQKLSDI SFS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009804982.10.0PREDICTED: transcription factor bHLH118-like
RefseqXP_009804989.10.0PREDICTED: transcription factor bHLH118-like
RefseqXP_016452590.10.0PREDICTED: transcription factor bHLH118-like
TrEMBLA0A1S3YKF90.0A0A1S3YKF9_TOBAC; transcription factor bHLH118-like
TrEMBLA0A1U7YLP60.0A0A1U7YLP6_NICSY; transcription factor bHLH118-like
STRINGXP_009804982.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.13e-33bHLH family protein