 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009804801.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
Family |
WRKY |
Protein Properties |
Length: 237aa MW: 27222.8 Da PI: 6.9532 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009804801.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 34.8 | 3.3e-11 | 134 | 157 | 1 | 24 |
---SS-EEEEEEE--TT-SS-EEE CS
WRKY 1 ldDgynWrKYGqKevkgsefprsY 24
ldDgy+WrKYG+K+vk++++pr Y
XP_009804801.1 134 LDDGYKWRKYGKKKVKSNTNPREY 157
59*********************9 PP
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2 | WRKY | 53.3 | 5.4e-17 | 167 | 209 | 17 | 59 |
T-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 17 gsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
g++ r+YY+C+s gC+vkkkver+ d +++++tYeg+Hnhe
XP_009804801.1 167 GNQLNRNYYKCSSGGCKVKKKVERDGIDSSYLITTYEGKHNHE 209
79999*************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 237 aa
Download sequence Send
to blast |
MFGSSTFQET SNISHQTINP NFAFSPLINM NQDHGHNMYQ DFDTSFIDQL INDGEEYSSS 60 NNSFNSTSLY SQNPFMQQEI STSTYSGNSS ASSFDATPTN IHMNENSSNK GIEKEKKAEK 120 HAIAFRTKTE LETLDDGYKW RKYGKKKVKS NTNPREYNIR NALTKWGNQL NRNYYKCSSG 180 GCKVKKKVER DGIDSSYLIT TYEGKHNHES PFIIYCDEKP TVSFHNDQWT LQADSLW
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | DQ460475 | 0.0 | DQ460475.1 Nicotiana tabacum cultivar Samsun NN putative WRKY transcription factor (WRKY12) mRNA, complete cds. |