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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009804476.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
NAC |
| Protein Properties |
Length: 248aa MW: 28321.1 Da PI: 9.129 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009804476.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 155.9 | 1.7e-48 | 16 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+++d++k++PwdLp e+e yfFs+r+ k+ +g+r+nrat+sgyWkatg dk+++s+
XP_009804476.1 16 LPPGFRFHPTDEELVVQYLKRKVFSFPLPA-SIIPDIDVHKSDPWDLPGD---LEQERYFFSTREMKHLKGNRSNRATNSGYWKATGLDKQIVSS 106
79****************************.89***************54...46799************************************9 PP
NAM 96 ....kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++lvg+kktLvfykg+ +g +tdW+mheyrl
XP_009804476.1 107 rgkqQQQLVGMKKTLVFYKGKPLHGCRTDWIMHEYRL 143
66655566***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MGMEKVNFVK IGGVRLPPGF RFHPTDEELV VQYLKRKVFS FPLPASIIPD IDVHKSDPWD 60
LPGDLEQERY FFSTREMKHL KGNRSNRATN SGYWKATGLD KQIVSSRGKQ QQQLVGMKKT 120
LVFYKGKPLH GCRTDWIMHE YRLANLEPNN IPTQENWVLC RIFLKKRGGS KNEDENMTQI 180
LDTTSCREGA KSKLVFYDFM NSWVPASSSV SGSSGITELS TNESDEHEDS SSCNSFTTSI 240
RRKNMALD
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 6e-48 | 1 | 171 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 6e-48 | 1 | 171 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 6e-48 | 1 | 171 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 6e-48 | 1 | 171 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-48 | 1 | 171 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 5e-48 | 1 | 171 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 5e-48 | 1 | 171 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 5e-48 | 1 | 171 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 5e-48 | 1 | 171 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 5e-48 | 1 | 171 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 5e-48 | 1 | 171 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 5e-48 | 1 | 171 | 7 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 6e-48 | 1 | 171 | 4 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 6e-48 | 1 | 171 | 4 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |
