![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009796771.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
GRAS |
Protein Properties |
Length: 568aa MW: 62343.5 Da PI: 4.7579 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009796771.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Nsy&pid=XP_009796771.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 455.2 | 4.1e-139 | 186 | 558 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
lv++L++cAeav++++l+ a+al+ ++ la ++ +m+++a+yf+eALa+r+++ + p+++ e++ +++l++ f+e++P+lkf+h
XP_009796771.1 186 LVHTLMACAEAVQQENLNVADALVRHIGILAVSQSGAMRKVATYFAEALARRIYK--------IYPQDSIESSYTDVLQM--HFYETCPYLKFAH 270
689****************************************************........44666654445555544..4************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
+taNqaIlea+ ++++vH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae++gv+fef+ +v+++l+dl+
XP_009796771.1 271 FTANQAILEAFTNCNKVHVIDFSLKQGMQWPALIQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVTNSLADLD 365
*********************************************************************************************** PP
GRAS 191 leeLrvkp...gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres... 279
e L++++ E++aVn+v++lhrll++++++e+ vL+ +k+++Pk+v++veqea+hn++ Fl+rf eal+yys++fdsle+++++ s
XP_009796771.1 366 AEILDLRSsteTEVVAVNSVFELHRLLARPGAVEK----VLNSIKQMNPKIVTIVEQEANHNASVFLDRFNEALHYYSTMFDSLESSVSTSStgl 456
****99988899***********************....************************************************66666666 PP
GRAS 280 ......eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpL 367
+++ ++++++lgr+i+nvvaceg +r+erhetl++Wr r+++aGF pv+l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL
XP_009796771.1 457 tqpivnNQDLVMSEVYLGRQICNVVACEGVDRVERHETLSQWRVRMNSAGFDPVHLGSNAFKQASMLLALFAgGDGYRVEENDGCLMLGWHTRPL 551
6666669**************************************************************************************** PP
GRAS 368 vsvSaWr 374
+++SaWr
XP_009796771.1 552 IATSAWR 558
******8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 568 aa
Download sequence Send
to blast |
MKRDRDREKS QDGSSSGKSK IFEEEQPDAG MDELLAVLGY KVKSSDMAEV AQKLEQLEMA 60 MCTTLEDGIS HLSTDTVHKN PSDLSGWVQS MLSELNNTSV PSNFDMIGSI GEKDLCVSPG 120 DGASSSSITI NEQNRIISDD DLRAIPGGAV FATESNKRQR SCVPLTADAT TRPVVLVDSQ 180 ETGVRLVHTL MACAEAVQQE NLNVADALVR HIGILAVSQS GAMRKVATYF AEALARRIYK 240 IYPQDSIESS YTDVLQMHFY ETCPYLKFAH FTANQAILEA FTNCNKVHVI DFSLKQGMQW 300 PALIQALALR PGGPPAFRLT GIGPPQPDNT DALQQVGWKL AQLAETIGVE FEFRGFVTNS 360 LADLDAEILD LRSSTETEVV AVNSVFELHR LLARPGAVEK VLNSIKQMNP KIVTIVEQEA 420 NHNASVFLDR FNEALHYYST MFDSLESSVS TSSTGLTQPI VNNQDLVMSE VYLGRQICNV 480 VACEGVDRVE RHETLSQWRV RMNSAGFDPV HLGSNAFKQA SMLLALFAGG DGYRVEENDG 540 CLMLGWHTRP LIATSAWRLK AAGDAELL
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). Its degradation is not essential for germination. {ECO:0000250, ECO:0000269|PubMed:15347801}. |