 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009793854.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
WRKY |
| Protein Properties |
Length: 323aa MW: 36761.5 Da PI: 5.2509 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009793854.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 76.6 | 3e-24 | 114 | 175 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+dDg++WrKYGqK++ s++pr+Y+rCt++ +C+++k+v++ +++p ++ +tY g+H+++
XP_009793854.1 114 VDDGHAWRKYGQKQILHSTYPRHYFRCTHKydqNCQATKQVQKIQDNPPLFRTTYYGNHTCK 175
59***************************9999***************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009862 | Biological Process | systemic acquired resistance, salicylic acid mediated signaling pathway |
| GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway |
| GO:0010200 | Biological Process | response to chitin |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:1900056 | Biological Process | negative regulation of leaf senescence |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MESPLPEKSS ADLKRAIDGL IRGQEFTRQL KEIIKKPLAT IMAEDLVGKI MNSFSETLSV 60
INSGESDEDT AEVKSPEDSS GSCKSTTTSF KDRRGCYKRR KTSETNTKES SDLVDDGHAW 120
RKYGQKQILH STYPRHYFRC THKYDQNCQA TKQVQKIQDN PPLFRTTYYG NHTCKPFPRV 180
SQIILDTPIH GDSSILLSFD RNNNNNNYSS IQNVNYNYQP YNIPTFPSIK QETKEEVFQR 240
SCTFYPKIED QNQSSNSDNF LLANDDHLST LTVFEASDGH MAATLSPDVI SSGVYSSCTT 300
STDNLEIDFD FEESLWNFEG YNS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in senescence, biotic and abiotic stress responses by modulating various phytohormones signaling pathways (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Required for the resistance (R) gene Mi-1-mediated resistance to potato aphid (e.g. M.euphorbiae) and root-knot nematode (e.g. M.javanica) (PubMed:21898085). {ECO:0000250|UniProtKB:Q9LY00, ECO:0000250|UniProtKB:Q9SUP6, ECO:0000269|PubMed:21898085}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced in response to potato aphid (e.g. M.euphorbiae) infestation and root-knot nematode (e.g. M.javanica) inoculation. Up-regulated by salicylic acid (SA) and suppressed by methyl jasmonate (MeJA). {ECO:0000269|PubMed:21898085}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU056918 | 1e-94 | EU056918.1 Solanum tuberosum WRKY transcription factor 6 mRNA, complete cds. |
