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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
XP_009793072.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
MYB |
| Protein Properties |
Length: 345aa MW: 39671.2 Da PI: 5.6628 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009793072.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 54.5 | 2.7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg W++eEde+l+++++ +G g+W+ ++++ g+ R++k+c++rw +yl
XP_009793072.1 14 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61
788*******************************************97 PP
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| 2 | Myb_DNA-binding | 53.3 | 6.4e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rgr+T+eE++l++ ++ G++ W+ Ia++++ gRt++++k++w+++
XP_009793072.1 67 RGRFTPEEEKLIISLHGAVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111
89********************.*********.************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:1901430 | Biological Process | positive regulation of syringal lignin biosynthetic process |
| GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY 60
LRPDIRRGRF TPEEEKLIIS LHGAVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKLKKFS 120
KPSTNNTTSI TDQQQRSQLA YNTITTSQPE IFLTQDIGMA KSQVLQDSTL LINSPNQLFF 180
FDNGSLDTMT NVNEATIRGT NNASLFQEIS VLNSEFWQVD QQQQQHQVQI SYTTGMDSNY 240
LPPLIETMVS PMEIPSSKYN NNNMIVEGQD NNQLNEEWSS TCSRITRTNR EMVESNEEWS 300
QIDTQQCCPS YLFWDQEIRS LGGDEIIDPN TSNNLGQILS SFPSL
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