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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009792504.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
TCP |
Protein Properties |
Length: 299aa MW: 33480 Da PI: 7.0933 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009792504.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 101.4 | 1.6e-31 | 51 | 196 | 2 | 104 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............................ss 67
g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WL+++ak++i+el+ + +
XP_009792504.1 51 FGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLINAAKHEIDELPPLqippgslnpnlypmlgigasqinkevgikN- 144
689*************************************************************666666665555555554433333333320. PP
TCP 68 ssaseceaesssssasnsssg.............................kaaksaakskksqksa 104
+s+ s++ ++++++++ +s++++
XP_009792504.1 145 --------------TSSTSINwdvplepsnnvalpynsnflkwdpsnlslAHSENHHHVTSSSHQH 196
..............2222222444444444444555555555555555552233332333333332 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009965 | Biological Process | leaf morphogenesis |
GO:0030154 | Biological Process | cell differentiation |
GO:0031347 | Biological Process | regulation of defense response |
GO:0045962 | Biological Process | positive regulation of development, heterochronic |
GO:0009507 | Cellular Component | chloroplast |
Sequence ? help Back to Top |
Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MITREVNKQE GDPNEDGNKS TPNNKASSSS NSTTSWTRLK DPRIVRVSRA FGGKDRHSKV 60 CTVRGLRDRR VRLSVPTAIQ LYDLQDRLGL NQPSKVVDWL INAAKHEIDE LPPLQIPPGS 120 LNPNLYPMLG IGASQINKEV GIKNTSSTSI NWDVPLEPSN NVALPYNSNF LKWDPSNLSL 180 AHSENHHHVT SSSHQHEDIH NFNLMSMPIG SQVLVYPQGL PQSFFHPHNI NAGASSDQFD 240 PKEINFQMLS SENPMSSANS FRHSIDSTSQ SHVRPFHFLP SQNSEGREPN DDREFHNSN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975441 | 1e-106 | HG975441.1 Solanum pennellii chromosome ch02, complete genome. |