PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009792222.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 324aa    MW: 37473.4 Da    PI: 4.2958
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009792222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.61.4e-2421324128
             NAM   4 GfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     G rFhPtd e++ +yL   v++++l+ ++  ++ +d+y   ePw++ +      +++++  yf ++++k+++t kr +r++ +g+Wk +gk +ev
  XP_009792222.1   2 GHRFHPTDREVL-KYLIGFVRDEPLHSQNElMQVADLYADkEPWQIFEvydqGNNNNNNTRYFITPQKKEKPTWKRVSRTVGKGTWKPQGKGREV 95 
                     99********99.9**********88766647777*997559****642332222244466********************************** PP

             NAM  93 lskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                     ++ kg+l+g  k+L +   +++++ ++ +W+m ey+l
  XP_009792222.1  96 FDDKGRLMGYVKSLKYIpANKSSNNVNGEWLMTEYSL 132
                     *****************656888889*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100527.9871155IPR003441NAC domain
PfamPF023653.0E-122132IPR003441NAC domain
SuperFamilySSF1019414.58E-272155IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MGHRFHPTDR EVLKYLIGFV RDEPLHSQNE LMQVADLYAD KEPWQIFEVY DQGNNNNNNT  60
RYFITPQKKE KPTWKRVSRT VGKGTWKPQG KGREVFDDKG RLMGYVKSLK YIPANKSSNN  120
VNGEWLMTEY SLFDRYLAAR EIKNKGFVIC KIKKKGKPGD KKKGNNIDEV VNDENMRDIE  180
EFINTVLQED VQVEDNGIRS NGTIAKLDDQ ENNIIQYVEG DQVRDHVLGL LDSTEDIVDV  240
NDHEEYVEDC VDEGDEVQVH LLEEYIDSVL QSEDVQAEDN GMMSSNDIIA KDDEENMEYQ  300
VEDNQHATFW ASAEDVDLDT INFC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009792222.10.0PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1U7XJI40.0A0A1U7XJI4_NICSY; NAC domain-containing protein 78-like
STRINGXP_009792222.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.12e-13NAC-domain protein 101