 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009788709.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
MYB |
| Protein Properties |
Length: 284aa MW: 31955 Da PI: 4.9793 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009788709.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 48.2 | 2.5e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT++Ed++l++ + G +W+++++ g++R++k+c++rw +yl
XP_009788709.1 14 KGPWTADEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61
79********************************************97 PP
|
| 2 | Myb_DNA-binding | 50.9 | 3.5e-16 | 71 | 111 | 5 | 47 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+ E++l +d++++lG++ W++Ia++++ gRt++++k++w+++
XP_009788709.1 71 SDAEEKLVIDLHARLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111
778***************.*********.************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 284 aa
Download sequence Send
to blast |
MGRQPCCDKL GVKKGPWTAD EDKKLINFIL TNGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60
LRPDLKRGLL SDAEEKLVID LHARLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLLKMG 120
IDPVTHEPLK KEANLIDQPI PESDQNKNNG HQQVQVVPEC TSVTAAATSS ELDNSSYSAS 180
SISSSENSSS ITDESKLVLN ALGENDPLLS SLLEVDAPLV DSLWELPVSC EEQKKFDNMA 240
SWDDSLNWLL DCQDFGIHDF GFDNCFNDVE LEVFNTIDDM ENKQ
|
| Functional Description ? help
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| Source |
Description |
| UniProt | R2R3 MYB-type transcription factor controlling the production of volatile benzoides in flowers by regulating the shikimate pathway, namely by activation of the 5-enol-pyruvylshikimate-3-phosphate synthase gene. This scent, mostly produced in the evening and night by the petals, attracts the pollinators. Anthocyanins production is not controlled by ODO1 as color and scent are produced at different stages of development. {ECO:0000269|PubMed:15805488}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Increases before the onset of volatile emission at the end of the light period, peaks at night and decreases when volatile emission declines early morning. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY705977 | 0.0 | AY705977.1 Petunia x hybrida MYB-like protein ODORANT1 mRNA, complete cds. |
| GenBank | JF793916 | 0.0 | JF793916.1 Petunia exserta MYB transcription factor ODO1 (ODO1) mRNA, complete cds. |
