PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009786835.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 424aa    MW: 48193.3 Da    PI: 4.5105
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009786835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM72.31.2e-22141473128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      G+rF+Ptdeelv +yL k v+ k++++ ++i+  d+y   +Pwd+  +++ ++++++ yfF+k ++++a g+r +r  +  g Wk   k+k+v+
  XP_009786835.1  14 LGIRFRPTDEELV-RYLLKFVSCKTFSC-DHIRVEDLYGNkKPWDIFeNNFLGDDTKVnYFFTKLKRTKADGSRFSRgLIGGGCWKGLDKSKPVF 106
                     59***********.9*************.88**99*996549****6455555555545******************999*************** PP

             NAM  94 skkgelvglkktLvfy.......kgrapkgektdWvmheyrl 128
                     + +++lvg kk++ +        +    + ++  W m+ey+l
  XP_009786835.1 107 K-GSKLVGFKKSFQYQekdscteRLGGDQVNNIVWNMKEYSL 147
                     9.9************9544443312223334889******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.41212174IPR003441NAC domain
SuperFamilySSF1019411.7E-2413174IPR003441NAC domain
PfamPF023656.6E-1415147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MTIISHNYGP YPVLGIRFRP TDEELVRYLL KFVSCKTFSC DHIRVEDLYG NKKPWDIFEN  60
NFLGDDTKVN YFFTKLKRTK ADGSRFSRGL IGGGCWKGLD KSKPVFKGSK LVGFKKSFQY  120
QEKDSCTERL GGDQVNNIVW NMKEYSLDDN ILKVLRQRNS IQYEDFVLCC IKRKSVHDHD  180
HEELGDHMVI AASGNNVVAV MNAMLLTTQE HELEYVTSSS EDHGTGFHDL CPSNQFSSSE  240
HNNVFQLQQD QNIEQLVNVE AQNIEEMAPS AQSHVEYVGR SSEEGTTSNQ FTYSSDNNDF  300
QLQQDHNIEC DHRDTVPSTL AEMMENIDHV DKESVRNIIR PMAQGSSSAG FVSDQWSVQQ  360
VQNIEERAPS TFTDMLTSSD YYAEPSLVIS SDECFTMEEL LGSDDDVIAA DLSWPSLDDH  420
LQTS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009786835.10.0PREDICTED: NAC domain-containing protein 19-like
RefseqXP_016500123.10.0PREDICTED: NAC domain-containing protein 19-like
TrEMBLA0A1S4CG560.0A0A1S4CG56_TOBAC; NAC domain-containing protein 19-like
TrEMBLA0A1U7XK200.0A0A1U7XK20_NICSY; NAC domain-containing protein 19-like
STRINGXP_009786835.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10426625
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-20NAC domain containing protein 2