PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009784940.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 401aa    MW: 45077.6 Da    PI: 6.9491
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009784940.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.24e-10177222454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +h +++r+ R ++N+++  Lr+l+P++     +K++ a+i+  A+ YI++L
  XP_009784940.1 177 KHFAADRQKRVHLNDKYKALRSLVPNP-----TKNDRASIVGDAIMYINEL 222
                     79*************************.....9***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.96E-9171226No hitNo description
SuperFamilySSF474593.93E-13171235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.783173222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-10177230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.2E-8177222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-6179228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MQHSYNTNNS NNSAIANSLT QEFVHESSSH QGPSFDQSNW GDISFPQFHH QLEDHHFQAP  60
LHTDMFPLHM TCSFSFTNTT HISSDGIRDL HTADGASTST AIYGPSLFPL NLPPNSPLIR  120
ELVHSTFGSL FNGMDTEVSG DLYQDAGEGK SRFDNGIFEF SADTSCMTKD RENKEIKHFA  180
ADRQKRVHLN DKYKALRSLV PNPTKNDRAS IVGDAIMYIN ELKRTVNELK ILVDKKMCCR  240
DRIKRQKSGP MNSADVKLRN EVDRSSLRSS WLQRKTTNTN EVDRSSLRSS WLQRKTTNTE  300
VDVRIVDDEV TVKLVQPKRI NCLLFVSKVL DDLQLDLHHV AGGLIGDCYS FLFNSKICEG  360
STVYAIAIAN KLIEIVDTEI SPCNTTSTPL QGNFLSALAK F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009784940.10.0PREDICTED: transcription factor bHLH91-like isoform X2
TrEMBLA0A1U7XEQ30.0A0A1U7XEQ3_NICSY; transcription factor bHLH91-like isoform X2
STRINGXP_009784938.10.0(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.12e-63bHLH family protein